Detail information of GWHGAAEX005204/evm.TU.scaffold_16.168
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0082 | 0 | G-protein alpha subunit (small G protein superfamily) |
| nr | gi|672107912|ref|XP_008782427.1| | 0 | PREDICTED: guanine nucleotide-binding protein alpha-1 subunit isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|O04279|GPA2_PEA | 0 | Guanine nucleotide-binding protein alpha-2 subunit |
| trEMBL | tr|F6H2T2|F6H2T2_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB46617.1} |
| TAIR | AT2G26300 | 0 | G protein alpha subunit 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000024 | 5202857 | 5240393 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005204
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00503.19 | G-alpha | 23 | 372 | 1.20E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K19729 | GNAT3 | Carbohydrate digestion and absorption | map04973 |
| Taste transduction | map04742 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007165 | Biological Process | signal transduction |
| GO:0007186 | Biological Process | G-protein coupled receptor signaling pathway |
| GO:0007188 | Biological Process | adenylate cyclase-modulating G-protein coupled receptor signaling pathway |
| GO:0001664 | Molecular Function | G-protein coupled receptor binding |
| GO:0003924 | Molecular Function | GTPase activity |
| GO:0019001 | Molecular Function | guanyl nucleotide binding |
| GO:0031683 | Molecular Function | G-protein beta/gamma-subunit complex binding |
| GO:0005834 | Cellular Component | heterotrimeric G-protein complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.050 |
| SRR2545915 | Juvenile tuber | 25.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.600 |
| SRR5643514 | five period of Gastrodia elata | 13.090 | |
| SRR5643515 | five period of Gastrodia elata | 13.620 | |
| SRR5643524 | five period of Gastrodia elata | 14.620 | |
| SRR5643525 | five period of Gastrodia elata | 23.560 | |
| SRR5643528 | five period of Gastrodia elata | 19.520 | |
| SRR5643658 | five period of Gastrodia elata | 24.410 | |
| SRR5643659 | five period of Gastrodia elata | 21.440 | |
| SRR5643660 | five period of Gastrodia elata | 20.050 | |
| SRR5643661 | five period of Gastrodia elata | 17.590 | |
| SRR5643662 | five period of Gastrodia elata | 16.050 | |
| SRR5643663 | five period of Gastrodia elata | 19.280 | |
| SRR5643664 | five period of Gastrodia elata | 19.040 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 19.540 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.960 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 35.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.080 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.590 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 25.590 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.550 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 17.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.320 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.77 |
| Juven | Juvenile tuber | 35.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 26.57 | |
| Mother_Juven | Mother tuber of Juvenile | 28.33 |