Detail information of GWHGAAEX005208/evm.TU.scaffold_16.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737935|ref|YP_007057479.1|2.00E-3150S ribosomal protein L11 methylase [Rivularia sp. PCC 7116]
KOGKOG14999.00E-156Protein arginine N-methyltransferase PRMT1 and related enzymes
nrgi|700257843|gb|AIU50528.1|0protein arginine methyltransferase 6, partial [Iris japonica]
Swissprottr|Q08A71|ANM6_ARATH0Probable protein arginine N-methyltransferase 6
trEMBLtr|A0A097PR98|A0A097PR98_9ASPA0Protein arginine methyltransferase 6 {ECO:0000313|EMBL:AIU50528.1} (Fragment)
TAIRAT3G200209.00E-156protein arginine methyltransferase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002454355255482615+
Transcript Sequence

Network for GWHGAAEX005208

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06325.12PrmA951697.80E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006479Biological Processprotein methylation
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.810
SRR2545915Juvenile tuber15.130
SRP108465SRR5643513five period of Gastrodia elata14.560
SRR5643514five period of Gastrodia elata14.590
SRR5643515five period of Gastrodia elata12.850
SRR5643524five period of Gastrodia elata13.920
SRR5643525five period of Gastrodia elata14.950
SRR5643528five period of Gastrodia elata11.280
SRR5643658five period of Gastrodia elata12.050
SRR5643659five period of Gastrodia elata13.030
SRR5643660five period of Gastrodia elata13.930
SRR5643661five period of Gastrodia elata13.700
SRR5643662five period of Gastrodia elata10.910
SRR5643663five period of Gastrodia elata12.010
SRR5643664five period of Gastrodia elata12.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.880
SRR6049655Rhizomagastrodiae_C368-T10_good_118.730
SRR6049656Rhizomagastrodiae_C368-T07_good_116.320
SRR6049657Rhizomagastrodiae_C368-T07_good_115.110
SRR6049658Rhizomagastrodiae_C368-T04_good_113.930
SRR6049659Rhizomagastrodiae_C368-T04_good_114.740
SRR6049660Rhizomagastrodiae_C368-T01_good_116.090
SRR6049661Rhizomagastrodiae_C368-T04_good_114.950
SRR6049662Rhizomagastrodiae_C368-T01_good_116.160
SRR6049663Rhizomagastrodiae_C368-T01_good_114.820
SRR6049664Rhizomagastrodiae_C368-T10_good_115.760
SRR6049665Rhizomagastrodiae_C368-T10_good_115.760
SRP279888GastroGastrodia elata tuber 12.18
JuvenJuvenile tuber25.17
Mother_GastroMother tuber of Gastrodia elata 16.44
Mother_JuvenMother tuber of Juvenile 21.62