Gene detail

Detail information of GWHGAAEX005214/evm.TU.scaffold_16.186

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|317123691\|ref\|YP_004097803.1\|	4.00E-118	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
nr	gi\|672115703\|ref\|XP_008780995.1\|	0	PREDICTED: subtilisin-like protease [Phoenix dactylifera]
Swissprot	tr\|O65351\|SUBL_ARATH	0	Subtilisin-like protease (Precursor)
trEMBL	tr\|A0A061DZB4\|A0A061DZB4_THECC	0	Subtilisin-like serine protease 2 {ECO:0000313\|EMBL:EOX97702.1}
TAIR	AT4G34980	0	subtilisin-like serine protease 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	5836815	5839775	+

Transcript Sequence
>GWHTAAEX005214 GTTTTTCTTAAGATTATTTGAAATCTAACTTTAGCTTTATTTTTTAATATTTGACATAATTTAAAGAAAATGAAGCATATAATTTTCATTTTTTAATTAATAACCAAATAAATAATTCGTCCGTCGGTTGCCCCCACACTCTTTCTGATACGGGCGCCTCACTTCTACTGTAAGCTGCCGCTCAGCTGAAACCCTTCCCTTCCCTTTCCGTGTATAAATAACCAGAACCTCAAACGCCGCCGCACATTCTAGCTCCGAGTCCCAGCCATGGCCGCTGCATCATCGACCCTTCTCTTCTTCTTCCTGCTCCTCCAAACCCTATCCGCTTCTTCCACCGTTGGCGACAGAAGGACCTACATCTTCCGCATCAACCATCTGATGAAACCCTCCATCTTCCCGACTCACGAAGACTGGTACTCGTCGCCCACTTTCCCCGTCTTCCCTCCCGCCTTGATCCACATATACTCCACCGTTTTCCATGGCTTCTCGGTCTCCCTGACCTCCGATGAGGCCGCCGCAGTTTCCGGTCATCCCGCCGTCCTCGCTGTCTTTCAAGATCGGCTTCGGCACCTCCACACAACCCGATCTCCCCAATTCCTAGGGCTTCGCAACCAGCAGGGCCTCTGGTCCGACTCCAACTACGGATCCGACATCATCATCGGCATCCTCGACACCGGCGTTTGGCCGGAGCGACGATCCTTCTCCGACCGAAGCATCGGCCCCATCCCATCCAGATGGCGCGGTTCCTGCGAGGCGGGAGCGTCCTTCCCCGCCTCGGCCTGCAACCGTAAGCTGATCGGCGCCCGGTTCTTCTCCCGCGGCCACGATGCCGCCGCCTCCGCCGCAGGCGGCATCGGCGGGATCAACGAAACGGTTGAGTTCAGATCTCCGCGGGATGCTGATGGGCACGGAACCCACACCGCTTCCACCGCTGCGGGTCGCCATGTCTTTGACGCTAGCCTGTCCGGATATGCCTCCGGCATCGCCAAGGGTGTCGCGCCCAAGGCTCGAATCGCGGCTTATAAGGTGTGCTGGAGTGGATCCGGTTGCTTGGATTCCGACATTCTCGCCGGCTTCGACCGCGCTGTTGCCGATGGCGTTGATGTGATTTCGGTTTCAATCGGCGGAGGGGAAGGCATCTCCTCTCCTTACTATCTCGATCCGATCGCCGTCGGTTCCTATGGCGCTGTCTCCAGAGGCGTTTTCGTCTCCTCATCCGCTGGCAACGATGGGCCTACTTCCATGTCTGTCACTAACCTAGCCCCCTGGCTCACCACCGTTGGCGCCGGCACAATCGACCGTTCTTTTCCTGCTGATATCGTCCTTGGAGATGGACGCCGTCTTGCTGGAGTATCCCTTTACTCCGGCCCCGCGATCGACGGCCAAATGTACCCATTAGTCTACCCTGGCAAATCGGGCGGACTGTCGGCTTCCCTCTGTATGGAGAGCTCCCTCAATCCGAAGCTCGTCAAGGGGAAAATCGTCATCTGCGATCGCGGAAGCAGCCCCCGTGTCGCGAAAGGGCTCGTCGTGAAAAATGCCGGCGGCATAGGCATGGTTCTCGCCAACGGAATTTCGAACGGCGAAGGACTTGTCGGCGACGCGCACGTTCTCCCCGCCTGCGCCGTCGGATCCGACGAAGGCGACGCTCTGAAATCTTACATCACTGCGAATGCAAACCCTACGGCTACCCTCGCTTTCCGTGGAACCATCGTCGGAGTGAAGCCAGCTCCCGTCGTCGCCTCTTTCTCCGGCCGTGGGCCTAATGGGCTCACGCCGGAGATTCTGAAGCCGGATCTAATCGCCCCAGGTGTTAACATCCTCGCTGCCTGGACCGACGCCGTCGGCCCCACCGGACTTGATTCCGATCATCGGAAAATGGAGTTCAACATTCTCTCCGGGACTTCGATGGCGTGCCCTCACGTCAGCGGCGCGGCCGCACTGCTCAAATCGGCGCATCCGTCATGGAGTCCGGCTGCTATCCGATCGGCGATGATGACGACGGCCAATCTGGTCAACAACCGGATTCAACCTGTGACCGACGAGGGCACCGGCGAGCCGGCGACGCCGCTCGACTTCGGCGCCGGTCATCTAAATCTTTTCAAGGCCATGGATCCTGGATTGGTGTACGACATGGGCGACGGCGACTACGTCGCCTTCCTCTGCGCGTTGGGGTACGAACCCAAGATGATTCAGATCGTCACGCACTCTCCGGCAATATGCCCGGCGAAGCGGCCGGCGGCAGGAAACCTCAATTACCCTTCGATTGCGGTGGTATTCGAAGGGGCGCCGACGGTGAACCAGAGCAAAACGGTGGTGAGGACGGTGACCAATGTTGGCTCCGCAGGGGCGGGGATTTATAGAGCTAGGGTGGATATGGTTGGGGGCGCCAAAGAGCTGTCGGTCAGGGTCAAGCCGGGGAAGCTGATTTTCTCGCCGGCCTCGAGGAAGCAGAGCTTTGCGGTGACGGTGACTGTGACGGCGACGGCGGCAACAGCGGCGGGTCCGGAGTACGGATACCTGACGTGGTCTGATGGTTCGCACGAGGTTCGTAGTGCTATCGTAGTCTCGAGGATCCTACCGTTGTGACTTTTTTGTTTTATTTTGAGAAGGGGTTGGTGTGGCGTGGTGTGTGGCTAACTATATAGCTAATGATGCTTTTGGCTCTTTGTGAATGAGATGCTGCTGGGACCGGTACTGAAAAGAGAGTTTCTCTATCAGTCCGTGATCACGTGATGGGCGCGTGACTTGTATCAAATATCTGTAGATGTAGCTATCTATCATCTGTGTCAAAAATTTTATGTTTTTGCACAAAAATGTAACTCCTTTATTAAGTATCGAGTTTTTGCCCATAGTTTTAAGTCTAGCCGGACTTTTCTCGTGTCATAATTAATTAATGTTTTTAGTGGATGGATTGTTTTTGTAATATTTTTTTAATCGTAGAAATTAAAATTTTGCTCG

Network for GWHGAAEX005214

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	43	103	5.80E-08
PF00082.21	Peptidase_S8	126	585	1.20E-49
PF02225.21	PA	375	462	6.20E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.730
SRP064423	SRR2545915	Juvenile tuber	14.910
SRP108465	SRR5643513	five period of Gastrodia elata	38.450
	SRR5643514	five period of Gastrodia elata	46.660
	SRR5643515	five period of Gastrodia elata	25.160
	SRR5643524	five period of Gastrodia elata	40.930
	SRR5643525	five period of Gastrodia elata	104.090
	SRR5643528	five period of Gastrodia elata	55.440
	SRR5643658	five period of Gastrodia elata	74.400
	SRR5643659	five period of Gastrodia elata	123.200
	SRR5643660	five period of Gastrodia elata	110.590
	SRR5643661	five period of Gastrodia elata	122.140
	SRR5643662	five period of Gastrodia elata	111.070
	SRR5643663	five period of Gastrodia elata	138.600
	SRR5643664	five period of Gastrodia elata	139.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	66.480
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	74.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	86.760
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	52.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	33.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	55.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	50.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	103.800
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	64.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	96.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	96.970
SRP279888	Gastro	Gastrodia elata tuber	171.05
	Juven	Juvenile tuber	106.82
	Mother_Gastro	Mother tuber of Gastrodia elata	5.25
	Mother_Juven	Mother tuber of Juvenile	32.50