Gene detail

Detail information of GWHGAAEX005227/evm.TU.scaffold_16.203

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|694380458\|ref\|XP_009366362.1\|	3.15E-21	PREDICTED: uncharacterized protein LOC103956149 [Pyrus x bretschneideri]
trEMBL	tr\|M5W708\|M5W708_PRUPE	3.00E-20	Uncharacterized protein {ECO:0000313\|EMBL:EMJ09522.1}
TAIR	AT4G39790	9.00E-15	Protein of unknown function (DUF630 and DUF632)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	6219177	6222330	-

Transcript Sequence
>GWHTAAEX005227 AAAAAGGGGAGCGGAGGGTGAAGCAGTCAATGTTTTGAGTGTCCTCTTCCTGGACGTGCATTCTCGGCTAGATTGGTGGTAGAGGTGGACGGAGAAGCATGATTAGAAGGAGAAGAACTGGTTGGTGCTTTTGGTGGACTGGAGGAGGCGTGGACCAAGTTTGGGGTATTGATGGCAGAGCAGCGGGTATTGAGAGGTTTGGGGGAGCAGTAGGTGAGGAGGTTTCTCAGAGAATTTAGAAGGCGAATGTATAATTTGTGCAAGAGATTTAGAATAGGCGTTCTGGATTTTGAGCACTATCGGGTGAGATTGTATGGAGGTTTTCTGAGGGGGTTTCGGGTGATAGGCGAGTTGCAATGTTGGGGCGGAGGGGGGAGTGGGTTGGGGGTGAGACTTAGGGGAATTGGATTGAAATCTCCTTGGTCGTCGATGAAGAGCTGCAACCACAACTTGCAGAGTTGATCCAAAGGTACATATCCTATTCCATTCGCTTGACTCAACATTATTTTGATAGAATTTCATCCATCTTTTATTTCCTTTTATTTTAGGTTGGTAAGAATGTAGAAGACCATGCTTGAATGCCATCAATCCCAGCACATCACAATCTCATCAGCTCATCATGCTAATAAGATCAACAACTCCTCAGCCCCATATCAAAATTCTGATTCTTACAAGCAAGCAGTCCTGAATCTGCTGAACGAGTTGGATTGCTTTCGTTCGAGCTTTGCGGCCTGGTTCGATGCCCAGCTATCCTACTGCGAGTCCCTCAATGGCTGGCTCCATAAATGCATTATGCAACCGCAAGAAAGAGTGCCTTTTTTGCTGCGCCGAGCCATTGCCCCCCGATTAAGAAATGAGACGTTTTATTTGAATCTTGAAAAAGATAGAGTAGCAGCTGATAATGAACTCCTGCAGCTTAAGGTAAAGGAGCTTGTAGCAGAACTCGAAGCAGCAAATATTCGGCTGGATTATGTACAAAAACAAACTCCATGGATTGCTACTTCCAAAGGAGATCTTCTAAAGATGATCAATAAAAATGGTTATTTAAACCATGAGATTAAAAGGCTGTTAGAAATATCTTCAGAGAATGAAGCGTGGCCGAGAAAAATGAAAGATAGGTTGAATGCTAAAATATCAGAACAGGAGGATCTGCTTGAAAGCCACAATGAAAGCCACAAGGAGCTACTAACCAAACACAAGCATTGGCGAGCGAGCCCTAACCCTCTTCCGAAAAAATTTGATACAGACTCGAGAGTGAAATCATGTTTGAACGAATCCGCAGATGCAGGAGATGGGTCGATCAGTGCTACCCTTCCTTGTAATCTGAGCTGCCACGTGTCCCAGCGGCAGAGCCCAATCTGCGAGCGCCTGATAACCCGCGGTGCACCCGACCAGGGTCTAAGTCGGTTTCCAAAAGGGAGTATATAA

Network for GWHGAAEX005227

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04782.11	DUF632	1	80	3.30E-18

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.120
	SRR5643514	five period of Gastrodia elata	0.390
	SRR5643515	five period of Gastrodia elata	0.160
	SRR5643524	five period of Gastrodia elata	0.100
	SRR5643525	five period of Gastrodia elata	0.170
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.040
	SRR5643659	five period of Gastrodia elata	0.090
	SRR5643660	five period of Gastrodia elata	0.780
	SRR5643661	five period of Gastrodia elata	0.160
	SRR5643662	five period of Gastrodia elata	0.780
	SRR5643663	five period of Gastrodia elata	0.550
	SRR5643664	five period of Gastrodia elata	0.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.100
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.090
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.040
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.000
SRP279888	Gastro	Gastrodia elata tuber	0.32
	Juven	Juvenile tuber	0.89
	Mother_Gastro	Mother tuber of Gastrodia elata	0.16
	Mother_Juven	Mother tuber of Juvenile	0.74