Detail information of GWHGAAEX005233/evm.TU.scaffold_16.209


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10120Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain
nrgi|743832896|ref|XP_010935106.1|0PREDICTED: synaptotagmin-2-like [Elaeis guineensis]
Swissprottr|B6ETT4|SYT2_ARATH0Synaptotagmin-2
trEMBLtr|Q6ETC4|Q6ETC4_ORYSJ0Putative CLB1 protein {ECO:0000313|EMBL:BAD28096.1}
TAIRAT1G200800Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002465954096614058+
Transcript Sequence

Network for GWHGAAEX005233

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17047.4SMP_LBD672461.40E-16
PF00168.29C22603582.40E-23
PF00168.29C24195203.70E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.490
SRR2545915Juvenile tuber37.250
SRP108465SRR5643513five period of Gastrodia elata16.020
SRR5643514five period of Gastrodia elata14.700
SRR5643515five period of Gastrodia elata15.750
SRR5643524five period of Gastrodia elata14.850
SRR5643525five period of Gastrodia elata17.680
SRR5643528five period of Gastrodia elata17.270
SRR5643658five period of Gastrodia elata19.540
SRR5643659five period of Gastrodia elata16.170
SRR5643660five period of Gastrodia elata19.840
SRR5643661five period of Gastrodia elata16.530
SRR5643662five period of Gastrodia elata15.900
SRR5643663five period of Gastrodia elata17.780
SRR5643664five period of Gastrodia elata18.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.900
SRR6049655Rhizomagastrodiae_C368-T10_good_121.970
SRR6049656Rhizomagastrodiae_C368-T07_good_115.470
SRR6049657Rhizomagastrodiae_C368-T07_good_117.030
SRR6049658Rhizomagastrodiae_C368-T04_good_117.730
SRR6049659Rhizomagastrodiae_C368-T04_good_116.820
SRR6049660Rhizomagastrodiae_C368-T01_good_114.400
SRR6049661Rhizomagastrodiae_C368-T04_good_115.780
SRR6049662Rhizomagastrodiae_C368-T01_good_115.090
SRR6049663Rhizomagastrodiae_C368-T01_good_113.510
SRR6049664Rhizomagastrodiae_C368-T10_good_116.600
SRR6049665Rhizomagastrodiae_C368-T10_good_116.600
SRP279888GastroGastrodia elata tuber 30.34
JuvenJuvenile tuber17.37
Mother_GastroMother tuber of Gastrodia elata 30.08
Mother_JuvenMother tuber of Juvenile 26.39