Detail information of GWHGAAEX005234/evm.TU.scaffold_16.210


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00486.00E-81Transcription factor, Myb superfamily
nrgi|297744620|emb|CBI37882.3|9.32E-87unnamed protein product [Vitis vinifera]
Swissprottr|P20025|MYB38_MAIZE2.00E-86Myb-related protein Zm38
trEMBLtr|Q84U44|Q84U44_9ASPA7.00E-87MYB10 {ECO:0000313|EMBL:AAO49419.1}
TAIRAT4G386206.00E-81myb domain protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002466315996632523+
Transcript Sequence

Network for GWHGAAEX005234

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14616.70E-15
PF00249.30Myb_DNA-binding671117.50E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.250
SRR2545915Juvenile tuber14.090
SRP108465SRR5643513five period of Gastrodia elata19.750
SRR5643514five period of Gastrodia elata14.650
SRR5643515five period of Gastrodia elata12.580
SRR5643524five period of Gastrodia elata20.940
SRR5643525five period of Gastrodia elata2.900
SRR5643528five period of Gastrodia elata1.210
SRR5643658five period of Gastrodia elata0.340
SRR5643659five period of Gastrodia elata5.420
SRR5643660five period of Gastrodia elata8.720
SRR5643661five period of Gastrodia elata10.720
SRR5643662five period of Gastrodia elata2.400
SRR5643663five period of Gastrodia elata1.210
SRR5643664five period of Gastrodia elata2.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.620
SRR6049655Rhizomagastrodiae_C368-T10_good_112.210
SRR6049656Rhizomagastrodiae_C368-T07_good_117.740
SRR6049657Rhizomagastrodiae_C368-T07_good_134.520
SRR6049658Rhizomagastrodiae_C368-T04_good_134.220
SRR6049659Rhizomagastrodiae_C368-T04_good_141.700
SRR6049660Rhizomagastrodiae_C368-T01_good_110.540
SRR6049661Rhizomagastrodiae_C368-T04_good_128.770
SRR6049662Rhizomagastrodiae_C368-T01_good_112.220
SRR6049663Rhizomagastrodiae_C368-T01_good_15.420
SRR6049664Rhizomagastrodiae_C368-T10_good_114.050
SRR6049665Rhizomagastrodiae_C368-T10_good_114.050
SRP279888GastroGastrodia elata tuber 2.48
JuvenJuvenile tuber0.53
Mother_GastroMother tuber of Gastrodia elata 88.77
Mother_JuvenMother tuber of Juvenile 16.53