Detail information of GWHGAAEX005240/CADD00431.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00171.00E-12FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
nrgi|596022357|ref|XP_007219089.1|1.55E-19hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
trEMBLtr|M5XFK1|M5XFK1_PRUPE6.00E-20Uncharacterized protein {ECO:0000313|EMBL:EMJ20288.1} (Fragment)
TAIRAT1G356471.00E-12transposable element gene

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002467327726734738+
Transcript Sequence

Network for GWHGAAEX005240

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.050
SRR2545915Juvenile tuber1.010
SRP108465SRR5643513five period of Gastrodia elata1.080
SRR5643514five period of Gastrodia elata1.020
SRR5643515five period of Gastrodia elata1.460
SRR5643524five period of Gastrodia elata1.500
SRR5643525five period of Gastrodia elata0.890
SRR5643528five period of Gastrodia elata1.210
SRR5643658five period of Gastrodia elata0.940
SRR5643659five period of Gastrodia elata2.270
SRR5643660five period of Gastrodia elata2.750
SRR5643661five period of Gastrodia elata2.620
SRR5643662five period of Gastrodia elata1.820
SRR5643663five period of Gastrodia elata3.090
SRR5643664five period of Gastrodia elata2.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.650
SRR6049655Rhizomagastrodiae_C368-T10_good_10.670
SRR6049656Rhizomagastrodiae_C368-T07_good_10.540
SRR6049657Rhizomagastrodiae_C368-T07_good_10.410
SRR6049658Rhizomagastrodiae_C368-T04_good_10.570
SRR6049659Rhizomagastrodiae_C368-T04_good_10.280
SRR6049660Rhizomagastrodiae_C368-T01_good_10.580
SRR6049661Rhizomagastrodiae_C368-T04_good_10.360
SRR6049662Rhizomagastrodiae_C368-T01_good_10.510
SRR6049663Rhizomagastrodiae_C368-T01_good_10.740
SRR6049664Rhizomagastrodiae_C368-T10_good_10.480
SRR6049665Rhizomagastrodiae_C368-T10_good_10.480
SRP279888GastroGastrodia elata tuber 2.65
JuvenJuvenile tuber2.32
Mother_GastroMother tuber of Gastrodia elata 2.87
Mother_JuvenMother tuber of Juvenile 2.68