Detail information of GWHGAAEX005242/evm.TU.scaffold_16.219


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|514732638|ref|XP_004957480.1|1.84E-119PREDICTED: thaumatin-like protein 1-like [Setaria italica]
Swissprottr|Q9FSG7|TP1A_MALDO5.00E-81Thaumatin-like protein 1a (Precursor)
trEMBLtr|K3ZVH7|K3ZVH7_SETIT7.00E-120Uncharacterized protein {ECO:0000313|EnsemblPlants:Si030608m}
TAIRAT4G386602.00E-103Pathogenesis-related thaumatin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002467403746743428-
Transcript Sequence

Network for GWHGAAEX005242

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00314.16Thaumatin372432.60E-79
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH152

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.450
SRR2545915Juvenile tuber5.030
SRP108465SRR5643513five period of Gastrodia elata28.400
SRR5643514five period of Gastrodia elata16.400
SRR5643515five period of Gastrodia elata15.210
SRR5643524five period of Gastrodia elata15.910
SRR5643525five period of Gastrodia elata21.560
SRR5643528five period of Gastrodia elata13.320
SRR5643658five period of Gastrodia elata18.480
SRR5643659five period of Gastrodia elata14.430
SRR5643660five period of Gastrodia elata10.490
SRR5643661five period of Gastrodia elata13.520
SRR5643662five period of Gastrodia elata15.210
SRR5643663five period of Gastrodia elata17.720
SRR5643664five period of Gastrodia elata15.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.670
SRR6049655Rhizomagastrodiae_C368-T10_good_1117.570
SRR6049656Rhizomagastrodiae_C368-T07_good_189.500
SRR6049657Rhizomagastrodiae_C368-T07_good_1159.850
SRR6049658Rhizomagastrodiae_C368-T04_good_148.630
SRR6049659Rhizomagastrodiae_C368-T04_good_140.640
SRR6049660Rhizomagastrodiae_C368-T01_good_181.350
SRR6049661Rhizomagastrodiae_C368-T04_good_150.270
SRR6049662Rhizomagastrodiae_C368-T01_good_159.140
SRR6049663Rhizomagastrodiae_C368-T01_good_124.970
SRR6049664Rhizomagastrodiae_C368-T10_good_133.130
SRR6049665Rhizomagastrodiae_C368-T10_good_133.130
SRP279888GastroGastrodia elata tuber 19.68
JuvenJuvenile tuber110.29
Mother_GastroMother tuber of Gastrodia elata 16.87
Mother_JuvenMother tuber of Juvenile 24.45