Detail information of GWHGAAEX005244/evm.TU.scaffold_16.221


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434394446|ref|YP_007129393.1|6.00E-174ABC-1 domain-containing protein [Gloeocapsa sp. PCC 7428]
KOGKOG12350Predicted unusual protein kinase
nrgi|743816310|ref|XP_010930610.1|0PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q8RWG1|Y4139_ARATH0Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic (Precursor)
trEMBLtr|A0A067KNP6|A0A067KNP6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP33439.1}
TAIRAT4G313900Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002467620216809583-
Transcript Sequence

Network for GWHGAAEX005244

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03109.15ABC12133332.00E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.430
SRR2545915Juvenile tuber25.470
SRP108465SRR5643513five period of Gastrodia elata15.820
SRR5643514five period of Gastrodia elata15.310
SRR5643515five period of Gastrodia elata16.190
SRR5643524five period of Gastrodia elata14.940
SRR5643525five period of Gastrodia elata17.010
SRR5643528five period of Gastrodia elata16.190
SRR5643658five period of Gastrodia elata20.330
SRR5643659five period of Gastrodia elata27.710
SRR5643660five period of Gastrodia elata32.710
SRR5643661five period of Gastrodia elata27.350
SRR5643662five period of Gastrodia elata25.960
SRR5643663five period of Gastrodia elata33.890
SRR5643664five period of Gastrodia elata35.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.770
SRR6049655Rhizomagastrodiae_C368-T10_good_118.180
SRR6049656Rhizomagastrodiae_C368-T07_good_118.210
SRR6049657Rhizomagastrodiae_C368-T07_good_117.370
SRR6049658Rhizomagastrodiae_C368-T04_good_120.000
SRR6049659Rhizomagastrodiae_C368-T04_good_122.770
SRR6049660Rhizomagastrodiae_C368-T01_good_119.790
SRR6049661Rhizomagastrodiae_C368-T04_good_117.810
SRR6049662Rhizomagastrodiae_C368-T01_good_114.310
SRR6049663Rhizomagastrodiae_C368-T01_good_114.620
SRR6049664Rhizomagastrodiae_C368-T10_good_114.700
SRR6049665Rhizomagastrodiae_C368-T10_good_114.700
SRP279888GastroGastrodia elata tuber 34.12
JuvenJuvenile tuber23.96
Mother_GastroMother tuber of Gastrodia elata 13.71
Mother_JuvenMother tuber of Juvenile 15.97