Detail information of GWHGAAEX005254/evm.TU.scaffold_16.234


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41185.00E-06Uncharacterized conserved protein
nrgi|586760413|ref|XP_006854230.1|1.60E-34hypothetical protein AMTR_s00048p00225630 [Amborella trichopoda]
trEMBLtr|U5D2R1|U5D2R1_AMBTC6.00E-35Uncharacterized protein {ECO:0000313|EMBL:ERN15697.1}
TAIRHS77058175.00E-06Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002471287227136605+
Transcript Sequence

Network for GWHGAAEX005254

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.570
SRR2545915Juvenile tuber10.990
SRP108465SRR5643513five period of Gastrodia elata13.790
SRR5643514five period of Gastrodia elata14.370
SRR5643515five period of Gastrodia elata10.180
SRR5643524five period of Gastrodia elata15.110
SRR5643525five period of Gastrodia elata17.280
SRR5643528five period of Gastrodia elata17.630
SRR5643658five period of Gastrodia elata22.780
SRR5643659five period of Gastrodia elata12.540
SRR5643660five period of Gastrodia elata10.030
SRR5643661five period of Gastrodia elata11.770
SRR5643662five period of Gastrodia elata10.570
SRR5643663five period of Gastrodia elata11.040
SRR5643664five period of Gastrodia elata11.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.240
SRR6049655Rhizomagastrodiae_C368-T10_good_110.340
SRR6049656Rhizomagastrodiae_C368-T07_good_15.550
SRR6049657Rhizomagastrodiae_C368-T07_good_16.530
SRR6049658Rhizomagastrodiae_C368-T04_good_15.710
SRR6049659Rhizomagastrodiae_C368-T04_good_12.980
SRR6049660Rhizomagastrodiae_C368-T01_good_16.480
SRR6049661Rhizomagastrodiae_C368-T04_good_17.940
SRR6049662Rhizomagastrodiae_C368-T01_good_19.110
SRR6049663Rhizomagastrodiae_C368-T01_good_17.920
SRR6049664Rhizomagastrodiae_C368-T10_good_112.090
SRR6049665Rhizomagastrodiae_C368-T10_good_112.090
SRP279888GastroGastrodia elata tuber 3.50
JuvenJuvenile tuber2.46
Mother_GastroMother tuber of Gastrodia elata 3.37
Mother_JuvenMother tuber of Juvenile 0.60