Detail information of GWHGAAEX005256/evm.TU.scaffold_16.236


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|225849930|ref|YP_002730164.1|3.00E-18ankyrin domain protein [Persephonella marina EX-H1]
KOGKOG05043.00E-67FOG: Ankyrin repeat
nrgi|672177412|ref|XP_008808800.1|4.07E-81PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [Phoenix dactylifera]
Swissprottr|Q6AWW5|Y5262_ARATH6.00E-10Ankyrin repeat-containing protein At5g02620
trEMBLtr|A0A061G768|A0A061G768_THECC3.00E-76Ankyrin repeat family protein {ECO:0000313|EMBL:EOY25431.1}
TAIRAT5G078403.00E-67Ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002471829427199326+
Transcript Sequence

Network for GWHGAAEX005256

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13606.5Ank_330580.00015
PF12796.6Ank_2641263.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.520
SRR2545915Juvenile tuber22.050
SRP108465SRR5643513five period of Gastrodia elata32.370
SRR5643514five period of Gastrodia elata27.720
SRR5643515five period of Gastrodia elata25.800
SRR5643524five period of Gastrodia elata29.670
SRR5643525five period of Gastrodia elata65.700
SRR5643528five period of Gastrodia elata74.110
SRR5643658five period of Gastrodia elata73.760
SRR5643659five period of Gastrodia elata32.110
SRR5643660five period of Gastrodia elata32.220
SRR5643661five period of Gastrodia elata27.670
SRR5643662five period of Gastrodia elata22.850
SRR5643663five period of Gastrodia elata23.730
SRR5643664five period of Gastrodia elata22.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.310
SRR6049655Rhizomagastrodiae_C368-T10_good_130.710
SRR6049656Rhizomagastrodiae_C368-T07_good_135.510
SRR6049657Rhizomagastrodiae_C368-T07_good_133.470
SRR6049658Rhizomagastrodiae_C368-T04_good_140.320
SRR6049659Rhizomagastrodiae_C368-T04_good_139.060
SRR6049660Rhizomagastrodiae_C368-T01_good_137.760
SRR6049661Rhizomagastrodiae_C368-T04_good_132.720
SRR6049662Rhizomagastrodiae_C368-T01_good_137.260
SRR6049663Rhizomagastrodiae_C368-T01_good_139.130
SRR6049664Rhizomagastrodiae_C368-T10_good_134.290
SRR6049665Rhizomagastrodiae_C368-T10_good_134.290
SRP279888GastroGastrodia elata tuber 34.35
JuvenJuvenile tuber24.06
Mother_GastroMother tuber of Gastrodia elata 46.34
Mother_JuvenMother tuber of Juvenile 35.16