Detail information of GWHGAAEX005259/evm.TU.scaffold_16.239


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743851753|ref|XP_010940220.1|3.72E-76PREDICTED: WUSCHEL-related homeobox 8-like [Elaeis guineensis]
Swissprottr|Q5QMM3|WOX8_ORYSJ4.00E-69WUSCHEL-related homeobox 8
trEMBLtr|M5VTE5|M5VTE5_PRUPE9.00E-74Uncharacterized protein {ECO:0000313|EMBL:EMJ04609.1} (Fragment)
TAIRAT4G355502.00E-60WUSCHEL related homeobox 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002473076377312577+
Transcript Sequence

Network for GWHGAAEX005259

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00046.28Homeobox991597.50E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-WOX

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.970
SRR2545915Juvenile tuber8.260
SRP108465SRR5643513five period of Gastrodia elata5.830
SRR5643514five period of Gastrodia elata6.560
SRR5643515five period of Gastrodia elata3.050
SRR5643524five period of Gastrodia elata7.210
SRR5643525five period of Gastrodia elata53.060
SRR5643528five period of Gastrodia elata49.710
SRR5643658five period of Gastrodia elata46.800
SRR5643659five period of Gastrodia elata3.740
SRR5643660five period of Gastrodia elata3.260
SRR5643661five period of Gastrodia elata2.790
SRR5643662five period of Gastrodia elata3.030
SRR5643663five period of Gastrodia elata3.840
SRR5643664five period of Gastrodia elata4.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.880
SRR6049655Rhizomagastrodiae_C368-T10_good_112.520
SRR6049656Rhizomagastrodiae_C368-T07_good_115.610
SRR6049657Rhizomagastrodiae_C368-T07_good_19.090
SRR6049658Rhizomagastrodiae_C368-T04_good_112.840
SRR6049659Rhizomagastrodiae_C368-T04_good_19.010
SRR6049660Rhizomagastrodiae_C368-T01_good_112.060
SRR6049661Rhizomagastrodiae_C368-T04_good_113.580
SRR6049662Rhizomagastrodiae_C368-T01_good_122.230
SRR6049663Rhizomagastrodiae_C368-T01_good_118.100
SRR6049664Rhizomagastrodiae_C368-T10_good_124.270
SRR6049665Rhizomagastrodiae_C368-T10_good_124.270
SRP279888GastroGastrodia elata tuber 7.39
JuvenJuvenile tuber8.95
Mother_GastroMother tuber of Gastrodia elata 17.04
Mother_JuvenMother tuber of Juvenile 7.66