Detail information of GWHGAAEX005264/evm.TU.scaffold_16.244
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 1.00E-22 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 3.00E-165 | Serine/threonine protein kinase |
| nr | gi|743833532|ref|XP_010935290.1| | 0 | PREDICTED: probable serine/threonine-protein kinase NAK [Elaeis guineensis] |
| Swissprot | tr|P43293|NAK_ARATH | 2.00E-154 | Probable serine/threonine-protein kinase NAK |
| trEMBL | tr|M0SEP7|M0SEP7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P14810_001} |
| TAIR | AT2G17220 | 3.00E-165 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000024 | 7452075 | 7454859 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005264
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 152 | 383 | 1.40E-39 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 60.750 |
| SRR2545915 | Juvenile tuber | 38.700 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 37.300 |
| SRR5643514 | five period of Gastrodia elata | 23.670 | |
| SRR5643515 | five period of Gastrodia elata | 42.100 | |
| SRR5643524 | five period of Gastrodia elata | 30.580 | |
| SRR5643525 | five period of Gastrodia elata | 34.430 | |
| SRR5643528 | five period of Gastrodia elata | 66.770 | |
| SRR5643658 | five period of Gastrodia elata | 31.320 | |
| SRR5643659 | five period of Gastrodia elata | 37.060 | |
| SRR5643660 | five period of Gastrodia elata | 27.660 | |
| SRR5643661 | five period of Gastrodia elata | 39.530 | |
| SRR5643662 | five period of Gastrodia elata | 34.540 | |
| SRR5643663 | five period of Gastrodia elata | 27.430 | |
| SRR5643664 | five period of Gastrodia elata | 33.650 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 39.590 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 36.230 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.730 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 48.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 51.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 72.200 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 53.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 48.960 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.810 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 38.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 49.36 |
| Juven | Juvenile tuber | 28.23 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 219.60 | |
| Mother_Juven | Mother tuber of Juvenile | 131.64 |