Detail information of GWHGAAEX005279/evm.TU.scaffold_16.259


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743833189|ref|XP_010935191.1|6.45E-107PREDICTED: transcription factor bHLH93-like [Elaeis guineensis]
Swissprottr|Q9LSL1|BH093_ARATH8.00E-85Transcription factor bHLH93
trEMBLtr|M0TW14|M0TW14_MUSAM1.00E-103Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P34120_001}
TAIRAT5G656403.00E-84beta HLH protein 93

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002479429657947711-
Transcript Sequence

Network for GWHGAAEX005279

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1251672.40E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.990
SRR2545915Juvenile tuber11.520
SRP108465SRR5643513five period of Gastrodia elata27.170
SRR5643514five period of Gastrodia elata34.490
SRR5643515five period of Gastrodia elata24.040
SRR5643524five period of Gastrodia elata25.840
SRR5643525five period of Gastrodia elata4.750
SRR5643528five period of Gastrodia elata10.330
SRR5643658five period of Gastrodia elata3.340
SRR5643659five period of Gastrodia elata22.750
SRR5643660five period of Gastrodia elata11.550
SRR5643661five period of Gastrodia elata14.980
SRR5643662five period of Gastrodia elata15.710
SRR5643663five period of Gastrodia elata19.310
SRR5643664five period of Gastrodia elata9.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.250
SRR6049655Rhizomagastrodiae_C368-T10_good_115.980
SRR6049656Rhizomagastrodiae_C368-T07_good_123.550
SRR6049657Rhizomagastrodiae_C368-T07_good_114.130
SRR6049658Rhizomagastrodiae_C368-T04_good_112.620
SRR6049659Rhizomagastrodiae_C368-T04_good_12.670
SRR6049660Rhizomagastrodiae_C368-T01_good_129.440
SRR6049661Rhizomagastrodiae_C368-T04_good_112.530
SRR6049662Rhizomagastrodiae_C368-T01_good_163.020
SRR6049663Rhizomagastrodiae_C368-T01_good_155.890
SRR6049664Rhizomagastrodiae_C368-T10_good_127.360
SRR6049665Rhizomagastrodiae_C368-T10_good_127.360
SRP279888GastroGastrodia elata tuber 9.73
JuvenJuvenile tuber326.39
Mother_GastroMother tuber of Gastrodia elata 5.27
Mother_JuvenMother tuber of Juvenile 49.87