Detail information of GWHGAAEX005283/evm.TU.scaffold_16.267


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743826109|ref|XP_010933187.1|7.96E-32PREDICTED: thaumatin-like protein 1b [Elaeis guineensis]
Swissprottr|O80327|TLP1_PYRPY2.00E-30Thaumatin-like protein 1 (Precursor)
trEMBLtr|U5GQX6|U5GQX6_POPTR1.00E-31Uncharacterized protein {ECO:0000313|EMBL:ERP65975.1}
TAIRAT1G750401.00E-27pathogenesis-related gene 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002482408878243689+
Transcript Sequence

Network for GWHGAAEX005283

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00314.16Thaumatin311794.00E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.220
SRR2545915Juvenile tuber1.710
SRP108465SRR5643513five period of Gastrodia elata146.940
SRR5643514five period of Gastrodia elata333.150
SRR5643515five period of Gastrodia elata386.430
SRR5643524five period of Gastrodia elata221.000
SRR5643525five period of Gastrodia elata0.110
SRR5643528five period of Gastrodia elata0.870
SRR5643658five period of Gastrodia elata0.160
SRR5643659five period of Gastrodia elata2.290
SRR5643660five period of Gastrodia elata1.440
SRR5643661five period of Gastrodia elata1.270
SRR5643662five period of Gastrodia elata0.100
SRR5643663five period of Gastrodia elata0.510
SRR5643664five period of Gastrodia elata0.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1419.400
SRR6049655Rhizomagastrodiae_C368-T10_good_1719.310
SRR6049656Rhizomagastrodiae_C368-T07_good_1379.310
SRR6049657Rhizomagastrodiae_C368-T07_good_1128.940
SRR6049658Rhizomagastrodiae_C368-T04_good_197.890
SRR6049659Rhizomagastrodiae_C368-T04_good_185.590
SRR6049660Rhizomagastrodiae_C368-T01_good_129.310
SRR6049661Rhizomagastrodiae_C368-T04_good_152.110
SRR6049662Rhizomagastrodiae_C368-T01_good_1409.310
SRR6049663Rhizomagastrodiae_C368-T01_good_195.490
SRR6049664Rhizomagastrodiae_C368-T10_good_11094.490
SRR6049665Rhizomagastrodiae_C368-T10_good_11094.490
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber4.11
Mother_GastroMother tuber of Gastrodia elata 66.19
Mother_JuvenMother tuber of Juvenile 152.66