Gene detail

Detail information of GWHGAAEX005288/evm.TU.scaffold_16.275

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337751456\|ref\|YP_004645618.1\|	1.00E-60	metallophosphoesterase [Paenibacillus mucilaginosus KNP414]
KOG	KOG1432	1.00E-151	Predicted DNA repair exonuclease SIA1
nr	gi\|695010593\|ref\|XP_009391970.1\|	0	PREDICTED: probable inactive purple acid phosphatase 29 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FMK9\|PPA29_ARATH	4.00E-152	Probable inactive purple acid phosphatase 29 (Precursor)
trEMBL	tr\|M0SE26\|M0SE26_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P12590_001}
TAIR	AT5G63140	1.00E-151	purple acid phosphatase 29

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000024	8360245	8364169	-

Transcript Sequence
>GWHTAAEX005288 TATAAAAGGAAGTGTCCGTCCGCAAGCTCTCTAAGAAGAAAGCAAATGAGTAAATTATACGCAGCGTTCCTCGTCTTCTTCCTAGCCGTGGTCGGCGAATCTGAAGAACGTCGATCTGCGCTCAGCCGGAGAGTAGGGCCAGTGAGCAGCGGCGGAGGCTCGTCGGAGCCACCGCGGCTCCGGTTCCGGAAGAAGGCGGGCGAGTTCAAGATTCTGCAGATTGCCGATATGCACTTCGCCGACGGGAAGGAGACGGGATGCCTCGATGTCTTTCCCGATCAGCTCTCCTCTTGCTCAGATCTGAACACCACGGCTTTCGTCTACCGCCTCATCCGCGCCGAGAATCCCGATTTCATCGTCTTTACGGGGGACAACATCTACGGAGCGGATTCGAAGGATGCGGCTGAATCGCTGAATGCAGCATTCAAGCCGGCGGTAGCGCTGAAGCTGCCATGGGCTGCAGTGCTGGGCAACCACGATCAAGAGGGAAGCCTGTCCCGGGAGGGAGTGATGCGGCACATTGCGGGGATGAAGCATTCCCTCTCGCAGCTGAACCCCGCCGGCATCGACATCATCGACGGCTTCGGGAACTACAATCTGGAAGTAGGCGGGGCCGAGGGATCTTCGCTGGCGAACAGATCCGTCCTCAACTTGTATTTTCTGGACAGCGGGGATTACTCCGACGCCCCTTCCGTCCCCGGATACAACTGGATCAAGCCATCGCAGCAGATCTGGTTCCAGAAGACTTCATCTCGGCTGCGGGCAGATCTGGCTGCACCCGGGCTCGCTTACTTCCACATTCCATTGCCGGAGTGGGGATTCTTCGACGGGTCGAACATGACAGGGGTGAGGCAGGAGGGGATTAGCTCGGCGTTGCTGAACTCGGGCTTCTTGGCGACGATGGCGGAGGCGGGGGATGTCAAGGCCGCCTTCTCAGGGCACGACCACCTCAACGACTTCTGCGGCAGCCTCGTCGGCATCCAGATCTGCTACTCAGGCGGATTCGGCTACCATGCCTACGGGAAGGCGGGTTGGGCGAGGAGGGCGAGGGTCGTTTCCGCAGCCCTGGAGAAGGCGCCCAGCGGGGAATGGGCAGGAGTCAAGTCGATAAGAACCTGGAAACGCCTCGATGACGACCGCCTTTCCACCATCGATGAGCAGATCCTCTGGATCAAGCCTTGATGAAGAAACACAGCCAAGCCGTATTTATACTGTTACCCGAGCGAAGGAGAAACTCTTTCTGGATTATAGTTTTTTCGCTTAAATTATTGCTCGGATTATGGAATGATAAGCGAAATGATATTTAAACTCAAAAAAATTCATATCCAATAGGTTTGTATATTTTTATAATATAAATAGTATTCTTATAATTTGTATTGAAATGAAATTTAAATCTTATTGGATAATTTTTTGAATGCTACTTATATTAGTAGGTCTAAATAATATTTTTGTATTGTTTGAATTTAA

Network for GWHGAAEX005288

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	54	302	2.00E-18

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	23.470
SRP064423	SRR2545915	Juvenile tuber	19.390
SRP108465	SRR5643513	five period of Gastrodia elata	40.390
	SRR5643514	five period of Gastrodia elata	41.660
	SRR5643515	five period of Gastrodia elata	45.150
	SRR5643524	five period of Gastrodia elata	44.580
	SRR5643525	five period of Gastrodia elata	169.000
	SRR5643528	five period of Gastrodia elata	184.330
	SRR5643658	five period of Gastrodia elata	178.210
	SRR5643659	five period of Gastrodia elata	52.900
	SRR5643660	five period of Gastrodia elata	60.220
	SRR5643661	five period of Gastrodia elata	64.330
	SRR5643662	five period of Gastrodia elata	70.610
	SRR5643663	five period of Gastrodia elata	50.700
	SRR5643664	five period of Gastrodia elata	58.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	46.790
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	38.600
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	43.730
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	54.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	61.420
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	48.760
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	50.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	47.640
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	55.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	55.340
SRP279888	Gastro	Gastrodia elata tuber	67.38
	Juven	Juvenile tuber	33.32
	Mother_Gastro	Mother tuber of Gastrodia elata	209.71
	Mother_Juven	Mother tuber of Juvenile	93.69