Gene detail

Detail information of GWHGAAEX005291/evm.TU.scaffold_160.4

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|320104706\|ref\|YP_004180297.1\|	3.00E-29	FKBP-type peptidylprolyl isomerase [Isosphaera pallida ATCC 43644]
KOG	KOG0552	1.00E-51	FKBP-type peptidyl-prolyl cis-trans isomerase
nr	gi\|672126313\|ref\|XP_008786603.1\|	5.01E-131	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP53 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q93ZG9\|FKB53_ARATH	2.00E-52	Peptidyl-prolyl cis-trans isomerase FKBP53
trEMBL	tr\|I1JAK5\|I1JAK5_SOYBN	4.00E-55	Peptidyl-prolyl cis-trans isomerase {ECO:0000256\|RuleBase:RU004231}
TAIR	AT4G25340	1.00E-51	FK506 BINDING PROTEIN 53

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000157	382467	405580	+

Transcript Sequence
>GWHTAAEX005291 CGCCGATTTGTTTCCGAAGCCGGGCCCTTTCAATTAGGGTTTTAGAGGGACTGTTCGACAGAGGCTCTTAGTTATTTAGTTTGCCTTGCATAAAAAAAACCTGCTGTCGGATTCGCTCTTCTCCCTGGTGCCCGATGGCCTTTTGGGGAGTTGAAGTAAAGCCTGCTAAGCCGTACGCCCATGCTTTTGATCAGTCACGCGGAAGGCTTCGTATCTCTCAGGCAACACTGGGTGATGGTAAGTCTACATTGAGGAGCACTGTACAGTGCAATTTTCACAACAGAAGTCCAGTTTTATTGTGCAATCTGATTCCCAATGTGTCCGAAACTTGTCATTTGGAATTGGAATTTGAAGAGGATGAAGAGGTCATCTTCTCTGTCCTTGGACAGAGAAGCGTCCATCTTACTGGTTATTATATTGGTCATGTGCGTAGCTTGGATGAAGATGATGTTGATGGGGAAGATATTGCTGAATCCGATACTTCTGATTCCTACAGTTATGACAGTGATGATGACTATGAATCTGATTTTATAGATGATTCTGAAGTTGCAGTATACACAGATTCTTCTGTGCGTAAAAGCAATGTTGTGATCGAGGAGATTGAAGATGATGACAAGCAACATGATGGGAATCATAACTTCAGGCGCTTGAAAAAGAAGCATGTGATTAGTGATTCTGAGGATACTAGTGATTATGAAAATACTGAAACTGTGTTTAAGCATCTAGTGGTGAAGAACAATGGAACTACGAAAGAGGAAAGTGAAGATGAACATGGTTTTCCTATTTGTTTTCCTGTGGAGAGTAAAAGTTCCAAAAAGAAGACAAATAAAGATAAGAAAAGGAAGATTGATACCATTATTAAAGATTCTGTTTCTGTTAGTGCTGCACATGTGGATTGTGATTCAACAGTGCCAATTGAATCAGGTTGTAAATATAATGAAAAACCAAAGAAAAAAAAGGGAAAGGATGAAAAACATTTTTTAGATTCTGGGAATGAAGTAAAACAGGATCAACCAAAGGAGAATGCCAGCATAGAAAAAAAATCTGAAATTGGTGCTAATCTCTTGGTTAAAAATAATGAAGGGCGTGCTAAGGGAAGCAATAATGAAGCTGAAGTTTTCAACATTGATTTGCATAATACTTTGGCTATGTCTGGTGAGCCTGATAACTGCAAACAGAGTAAGAAAAAATCCAAAAAGAGAAGGGTTAAAGTAGAAAGCATGTCTGATGAGAATAACTCATGCAAAGAGGGCAAAATTGATACTGATACAGTACCAAATGTGGATGTAAAGCCTCTTGATATCTCTGCTTCTACCGCTGAAAATGCGTTGAAGAAAAAGAAGAAAAACAAGAAAAACAGAGATTCAAAGATGGAGACATTAGTATATGGGAAAACTGATCAGGTGAATGGTGTTGATGATTTGCAGCACAGATCCCAGCCCACCAAAACCCGAACTTTTCCTAATGGTCTTATAGTAGAGGAAGTGTTTATGGGTAAACCGGATGGAAAGAAGGCCTCTCCTGGAAAGAAGGTATCAGTTTGGTATATTGGCAAGCTAAAAAACGGAACTATTTTTGATTCCAACATTGGCCGAAAGCCTTTCAAATTCCGACTCGGCATTGGCGAAGTTATAAAGGGATGGGATATAGGTGTAGGCGTAGGCGGAATGCGCGTTGGCGACAAGAGAAGGCTCACTGTTCCTCCATCGTTCGGATATGGAGAGAAAGCTGTGGGAAAGATTCCGCCAAACTCGTGGCTTGTTTTTGACGTTGAGTTGGTAGATGTGCAGTGAAAAATGTAGCGTCTCCAATTCATTGCCGAGCTCCCAATATTTTATTTTTTGAGCCAGCAGTTTTTCTTAAATAGTTTATATTTGGCTCCTAGTTTGTCAGTCAAGCTCTATATAAATTATAATAGAATGTTTTCGTGCAAGTGCGATTTATGGTTCCTATATGCAGTTTTCGGCTGGGATATTTTCAATATAATACCTCTTTTATCACTCGCTGTTGTTGGTGAGATTTATGGTTGCAATCGCAGTTTTCCTTTTAAC

Network for GWHGAAEX005291

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00254.27	FKBP_C	459	549	6.40E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	56.320
SRP064423	SRR2545915	Juvenile tuber	55.630
SRP108465	SRR5643513	five period of Gastrodia elata	36.910
	SRR5643514	five period of Gastrodia elata	29.590
	SRR5643515	five period of Gastrodia elata	28.600
	SRR5643524	five period of Gastrodia elata	27.000
	SRR5643525	five period of Gastrodia elata	17.020
	SRR5643528	five period of Gastrodia elata	16.020
	SRR5643658	five period of Gastrodia elata	16.680
	SRR5643659	five period of Gastrodia elata	53.090
	SRR5643660	five period of Gastrodia elata	54.180
	SRR5643661	five period of Gastrodia elata	52.480
	SRR5643662	five period of Gastrodia elata	42.460
	SRR5643663	five period of Gastrodia elata	45.690
	SRR5643664	five period of Gastrodia elata	47.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.330
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	31.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.770
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	28.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.770
SRP279888	Gastro	Gastrodia elata tuber	41.05
	Juven	Juvenile tuber	39.89
	Mother_Gastro	Mother tuber of Gastrodia elata	18.83
	Mother_Juven	Mother tuber of Juvenile	22.35