Detail information of GWHGAAEX005292/evm.TU.scaffold_160.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 4.00E-24 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|672116343|ref|XP_008781331.1| | 0 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Phoenix dactylifera] |
| Swissprot | tr|Q9CAL3|CRK2_ARATH | 8.00E-168 | Cysteine-rich receptor-like protein kinase 2 (Precursor) |
| trEMBL | tr|J3M3P0|J3M3P0_ORYBR | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G12140.1} |
| TAIR | AT1G70520 | 3.00E-167 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000157 | 496060 | 499653 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005292
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01657.16 | Stress-antifung | 49 | 129 | 2.50E-10 |
| PF01657.16 | Stress-antifung | 157 | 240 | 1.90E-10 |
| PF07714.16 | Pkinase_Tyr | 323 | 591 | 8.10E-48 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.240 |
| SRR2545915 | Juvenile tuber | 11.610 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.490 |
| SRR5643514 | five period of Gastrodia elata | 18.610 | |
| SRR5643515 | five period of Gastrodia elata | 20.790 | |
| SRR5643524 | five period of Gastrodia elata | 17.440 | |
| SRR5643525 | five period of Gastrodia elata | 26.520 | |
| SRR5643528 | five period of Gastrodia elata | 30.500 | |
| SRR5643658 | five period of Gastrodia elata | 26.100 | |
| SRR5643659 | five period of Gastrodia elata | 20.660 | |
| SRR5643660 | five period of Gastrodia elata | 20.980 | |
| SRR5643661 | five period of Gastrodia elata | 24.550 | |
| SRR5643662 | five period of Gastrodia elata | 24.890 | |
| SRR5643663 | five period of Gastrodia elata | 20.530 | |
| SRR5643664 | five period of Gastrodia elata | 24.600 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.480 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.160 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.530 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.020 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.580 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.330 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.52 |
| Juven | Juvenile tuber | 7.82 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 57.23 | |
| Mother_Juven | Mother tuber of Juvenile | 18.50 |