Detail information of GWHGAAEX005296/evm.TU.scaffold_160.15
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|384152901|ref|YP_005535717.1| | 3.00E-21 | serine/threonine protein kinase [Amycolatopsis mediterranei S699] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743763862|ref|XP_010912131.1| | 0 | PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|B9DFG5|PTI13_ARATH | 0 | PTI1-like tyrosine-protein kinase 3 |
| trEMBL | tr|C6ZRT7|C6ZRT7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G38980.2} |
| TAIR | AT3G59350 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000157 | 1143399 | 1165463 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005296
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 75 | 347 | 1.00E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIII |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13436 | PTI1 | Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004713 | Molecular Function | protein tyrosine kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 45.420 |
| SRR2545915 | Juvenile tuber | 39.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.590 |
| SRR5643514 | five period of Gastrodia elata | 37.290 | |
| SRR5643515 | five period of Gastrodia elata | 38.300 | |
| SRR5643524 | five period of Gastrodia elata | 37.840 | |
| SRR5643525 | five period of Gastrodia elata | 47.220 | |
| SRR5643528 | five period of Gastrodia elata | 76.450 | |
| SRR5643658 | five period of Gastrodia elata | 57.110 | |
| SRR5643659 | five period of Gastrodia elata | 51.330 | |
| SRR5643660 | five period of Gastrodia elata | 43.180 | |
| SRR5643661 | five period of Gastrodia elata | 48.790 | |
| SRR5643662 | five period of Gastrodia elata | 44.010 | |
| SRR5643663 | five period of Gastrodia elata | 44.970 | |
| SRR5643664 | five period of Gastrodia elata | 41.760 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.870 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 32.460 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 41.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 34.100 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 39.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 38.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 41.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 39.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 45.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 45.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 53.09 |
| Juven | Juvenile tuber | 26.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 49.73 | |
| Mother_Juven | Mother tuber of Juvenile | 50.53 |