Detail information of GWHGAAEX005300/evm.TU.scaffold_160.22
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|337749462|ref|YP_004643624.1| | 1.00E-31 | cytochrome P450 hydroxylase [Paenibacillus mucilaginosus KNP414] |
| KOG | KOG0156 | 9.00E-117 | Cytochrome P450 CYP2 subfamily |
| nr | gi|728839803|gb|KHG19246.1| | 1.13E-154 | Cytochrome P450 [Gossypium arboreum] |
| Swissprot | tr|O81974|C71D8_SOYBN | 3.00E-157 | Cytochrome P450 71D8 |
| trEMBL | tr|V7B944|V7B944_PHAVU | 9.00E-154 | Uncharacterized protein {ECO:0000313|EMBL:ESW14397.1} |
| TAIR | AT3G26300 | 9.00E-117 | cytochrome P450, family 71, subfamily B, polypeptide 34 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000157 | 1826811 | 1828783 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005300
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 40 | 201 | 3.30E-21 |
| PF00067.21 | p450 | 198 | 446 | 1.10E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B34 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.610 |
| SRR2545915 | Juvenile tuber | 18.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.410 |
| SRR5643514 | five period of Gastrodia elata | 34.590 | |
| SRR5643515 | five period of Gastrodia elata | 32.810 | |
| SRR5643524 | five period of Gastrodia elata | 40.460 | |
| SRR5643525 | five period of Gastrodia elata | 0.060 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.050 | |
| SRR5643659 | five period of Gastrodia elata | 2.370 | |
| SRR5643660 | five period of Gastrodia elata | 5.010 | |
| SRR5643661 | five period of Gastrodia elata | 3.550 | |
| SRR5643662 | five period of Gastrodia elata | 1.480 | |
| SRR5643663 | five period of Gastrodia elata | 0.930 | |
| SRR5643664 | five period of Gastrodia elata | 1.270 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.610 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.220 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.740 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.250 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.710 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.910 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.750 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.230 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.230 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.20 |
| Juven | Juvenile tuber | 2.24 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.05 | |
| Mother_Juven | Mother tuber of Juvenile | 20.22 |