Detail information of GWHGAAEX005305/evm.TU.scaffold_161.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG43417.00E-20F-box protein containing LRR
nrgi|695015121|ref|XP_009394415.1|5.00E-135PREDICTED: F-box protein At4g02733-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SY03|FB219_ARATH5.00E-58F-box protein At4g02760
trEMBLtr|M0SIY0|M0SIY0_MUSAM2.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P29640_001}
TAIRAT4G027407.00E-20F-box/RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001661131070789+
Transcript Sequence

Network for GWHGAAEX005305

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.210
SRR2545915Juvenile tuber1.290
SRP108465SRR5643513five period of Gastrodia elata6.510
SRR5643514five period of Gastrodia elata4.720
SRR5643515five period of Gastrodia elata8.600
SRR5643524five period of Gastrodia elata6.540
SRR5643525five period of Gastrodia elata1.880
SRR5643528five period of Gastrodia elata6.100
SRR5643658five period of Gastrodia elata3.030
SRR5643659five period of Gastrodia elata5.800
SRR5643660five period of Gastrodia elata6.210
SRR5643661five period of Gastrodia elata6.680
SRR5643662five period of Gastrodia elata4.610
SRR5643663five period of Gastrodia elata2.440
SRR5643664five period of Gastrodia elata2.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.260
SRR6049655Rhizomagastrodiae_C368-T10_good_14.660
SRR6049656Rhizomagastrodiae_C368-T07_good_11.530
SRR6049657Rhizomagastrodiae_C368-T07_good_11.530
SRR6049658Rhizomagastrodiae_C368-T04_good_10.620
SRR6049659Rhizomagastrodiae_C368-T04_good_10.200
SRR6049660Rhizomagastrodiae_C368-T01_good_11.220
SRR6049661Rhizomagastrodiae_C368-T04_good_10.300
SRR6049662Rhizomagastrodiae_C368-T01_good_11.580
SRR6049663Rhizomagastrodiae_C368-T01_good_11.020
SRR6049664Rhizomagastrodiae_C368-T10_good_12.920
SRR6049665Rhizomagastrodiae_C368-T10_good_12.920
SRP279888GastroGastrodia elata tuber 1.91
JuvenJuvenile tuber5.66
Mother_GastroMother tuber of Gastrodia elata 11.06
Mother_JuvenMother tuber of Juvenile 9.74