Detail information of GWHGAAEX005317/evm.TU.scaffold_161.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225435694|ref|XP_002283442.1|1.00E-35PREDICTED: protein YLS3-like [Vitis vinifera]
Swissprottr|O64864|YLS3_ARATH5.00E-30Protein YLS3 (Precursor)
trEMBLtr|A0A059D8M7|A0A059D8M7_EUCGR3.00E-35Uncharacterized protein {ECO:0000313|EMBL:KCW87093.1}
TAIRAT1G552606.00E-30Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000166500207504319-
Transcript Sequence

Network for GWHGAAEX005317

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14368.5LTP_2221192.00E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006869Biological Processlipid transport
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.390
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.310
SRR5643514five period of Gastrodia elata0.230
SRR5643515five period of Gastrodia elata0.100
SRR5643524five period of Gastrodia elata0.260
SRR5643525five period of Gastrodia elata1.250
SRR5643528five period of Gastrodia elata2.420
SRR5643658five period of Gastrodia elata29.930
SRR5643659five period of Gastrodia elata0.420
SRR5643660five period of Gastrodia elata0.190
SRR5643661five period of Gastrodia elata0.570
SRR5643662five period of Gastrodia elata0.470
SRR5643663five period of Gastrodia elata0.350
SRR5643664five period of Gastrodia elata0.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.500
SRR6049655Rhizomagastrodiae_C368-T10_good_11.840
SRR6049656Rhizomagastrodiae_C368-T07_good_11.950
SRR6049657Rhizomagastrodiae_C368-T07_good_16.250
SRR6049658Rhizomagastrodiae_C368-T04_good_118.030
SRR6049659Rhizomagastrodiae_C368-T04_good_122.520
SRR6049660Rhizomagastrodiae_C368-T01_good_19.260
SRR6049661Rhizomagastrodiae_C368-T04_good_110.890
SRR6049662Rhizomagastrodiae_C368-T01_good_12.480
SRR6049663Rhizomagastrodiae_C368-T01_good_11.440
SRR6049664Rhizomagastrodiae_C368-T10_good_10.310
SRR6049665Rhizomagastrodiae_C368-T10_good_10.310
SRP279888GastroGastrodia elata tuber 0.77
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.25
Mother_JuvenMother tuber of Juvenile 0.19