Gene detail

Detail information of GWHGAAEX005326/CADD00446.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000166	707186	708875	-

Transcript Sequence
>GWHTAAEX005326 CTTTGCATAATTGCATAATCGATCCATTTAAAGATCGATTAAATTGCAGAATAGATATAGAGGAGAAATGAGGTTTTCTTTTTGAGTTTTATTAAATCTAAGATATAAACTCATTCAACTATAATTTAATCAAAGATATGATCGAAATTGTGTCTTCTTTTTCTCGTTTGTCAATCTCATCTTGGTGCTTCATCCAAGATTTTTATTACGTGTTGTTTTAAGTATGAATTTAGTTTGTAGTGCATTAAAAAAACATTTGAATTTAGTCCCTTGAATCAGAGATTATTAGCTATTGATAATAACAGACTCATTTGGTATTTTAAAATATTCATACTACATATTGTTTGAGTCTACAAAATCCTTACAATAAGCTACAGCACAGATTCCGGATGGAGATCCTAAATTACTAAGATCAATTGGTATCCCATACAACAAATCTTAAGTACAGGGACGAACTCCTATCAAGTTCATATGGGTTCTTTCACAGCTCACATAAAGCCAATAATTGAATGAAGCATACGAGCACTTATTAGCAAGAAGATACAAGATCCAATCTATCATATTAAGTATTATTATAGATTATTGTAATCCCAACGGAACTAAATCCAAAAGGGCTCAAATAAGCTCTATAAGAGTTCAACTATTGATTTTATGGATAACGCAAGTCATTTAATGCAAATTTAGTGTATTTTTTTTGGGTTGAGAATTACATGTTTTAATCTTTATTTTGATTTATCAAATTCTTTGATTTGAACATTTGATAGACTCAAAATAGAGAGCAGCAGTTTATTAGTGTGAGAGCAGTATATTGGGTGATTTATGTAAAAGCTTAGTGGTTTAGTATGAGAGCACTAGTTTATTAGTGTCATAGCAGCAATATTTTGTTGTTATTATTATTGCTTGGTACCTTAGAAGAAGCTTGCTTCATCTTCGCCCTCCTCTGGTTATTTTAAATTTTATATTTTGTGCAGTGAGCGTTTGATTGTGTTTGTGACGGTGTTCTCAATTTCATGTTTTACCAGCTGAGGCAGAATAAGAGACATTCATTATTTCAGAGTGTGATGAACCTCAATACTTTTTCACAAATTTCTAGTTTGATTTAATTCATTGAAACTCTCAAATCAAACTAGAAATAATTATAACGCCAAACTGGATGAAATCAAAGCGTAGGGAGTAGTACCTTGCGGTTTACGAATCTCAGCCTTACGCCGATTTAAGATCCGGCTGTTTATCTCGATCCAACCCTCACTCTCCTCTCCCAACTTAGCAAAAATCCTTCAATCTTATGGCACAATTTGATCAATTTGACGACATACTTTTGATTCTTTGGTGAATGATGGCTGCGTCAAGAAGGAGCTTTGAGGAAGAGCCATGATGAGAAGAGGCTAGTGCCTTAGCTCAGCGAAGTGTTGCAGCAGCTGGAAGAGGACGACCGGGCTCTTGTCTTTCAACAGAGGGGAAGGGGAGACCGAGCTCTCCGCTTCTCGCTGAGAGGAAGACTCGAAGATGGTTTTGCAGGATGAGAGAGGGGAAGGTGATAGAGTCGCCGATAATGGAAAGTTGATTGCAATCGATTTGATATAGTGGAGAATCGGTGAGGGAGAAAGGCTGCCTTTGGCCCAGGAGAGGAGGAGGGGCGATCGGCGCGTAGAAAGGAAGATGGATCTTTTGGCTGAGGAGAGGAATTAAA

Network for GWHGAAEX005326

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	3.200
	SRR5643514	five period of Gastrodia elata	3.060
	SRR5643515	five period of Gastrodia elata	4.090
	SRR5643524	five period of Gastrodia elata	2.850
	SRR5643525	five period of Gastrodia elata	9.240
	SRR5643528	five period of Gastrodia elata	5.050
	SRR5643658	five period of Gastrodia elata	5.800
	SRR5643659	five period of Gastrodia elata	7.380
	SRR5643660	five period of Gastrodia elata	11.130
	SRR5643661	five period of Gastrodia elata	8.610
	SRR5643662	five period of Gastrodia elata	12.810
	SRR5643663	five period of Gastrodia elata	10.050
	SRR5643664	five period of Gastrodia elata	16.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.750
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.460
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.940
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.870
SRP279888	Gastro	Gastrodia elata tuber	11.10
	Juven	Juvenile tuber	10.18
	Mother_Gastro	Mother tuber of Gastrodia elata	7.85
	Mother_Juven	Mother tuber of Juvenile	10.06