Gene detail

Detail information of GWHGAAEX005327/evm.TU.scaffold_161.26

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743759834\|ref\|XP_010934035.1\|	PREDICTED: uncharacterized protein LOC105054248 [Elaeis guineensis]
trEMBL	tr\|B9I325\|B9I325_POPTR	Uncharacterized protein {ECO:0000313\|EMBL:EEE96222.2}
TAIR	AT1G18950	DDT domain superfamily

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000166	752799	780650	+

Transcript Sequence
>GWHTAAEX005327 TGTTCATCAAAATTACCGATTATGCCCTTTCCCACAAAAACCCTTTTCTTCCCACTCCACCCTCTGCCCTCTTTCTTCTCCCCCCTCTCCGATTTTCATCCTCCCCTTTTTCTTCTCCTTATGATCTCTGCTACGTCATGTGGCTGCCTCCCAAGATTCACTCCAGTCGCCTCTTTCCCAATTTGTCGTCAATTTTTCTTTTCCACCTCGCCCGCACCCCGATCTTCCTCATAGTCCCTCCCTGCCTCCTCAGTACGCCGTGATGTCGGCGGAAGTTTCTCCAGCGGTTGAGCCGCCGGAAAGATCCTCATCAGAGGATCAATTTCAGCAGGACAGCTCGATCCGCAAGTCACGCCCTGCGCGGGCATGCACCGCTCGCTCCTACGCTCGACTTCAGGATCCTGCGCCGGAGCGCCGTTCCATCACTGGCTGTGTCGTCACCCGTCGGGAGAAGGAGGAACATCAGCCGGTTTGCAGGATTATCACCTCGCTGACTCAACAGCCAACGCCGGCGCAGCTGCCGCGGTGGACTCTCCGTTCCATGTGGGAACTTGCCTCCGTTCTCAACTTCTTGAATGTATTCAGGCCATTGCTGAATATAGCGGTGGAGTTCTCAGCTGAGGAGCTTGAGACAGCGTTGCTGGTTCCTAATAGTACATTGGATGATATCCACATACCGTTGCTAAAGGCTATACCACCTGTGATCCGTATGGCTTTAGGTCGGGCAACTTGGGTTACTGTTTTGTGCAGGAAGATAAAAGATTGGTGGCATTGGGTAGCAGATGGGGACATACCAATAGCCGCATCACATGGGACTGAGATTGAGATATACAAGAATCTTGAACCAGCGATCCGTGTGTTGATTTTAAAAGCAATATGCGACATTCGTGTAGAGCAAGAAGACATCAAAAATTATATTGATGATTCTTTGAAGCATGGAGTCCATCTTTCAATTTTTCGTAAAGAGCGGATTGGTGGTGATTCTCAAGGAGTTTCTTACTGGTATGAGGATGATGAAATTATAGGTCATCGATTATATCGAGAAATTAAAAAAGTTGAGGTCAAGAAGGGCAAGGGAAAAACTGTATCTGCTCCTCTTAATGCCTCCTACCAATGGGAAGTGATTGCATCTAATTTGGATGAATTTCAAGAAGTTTCAGACAAACTACTTGAAAGCAAGAATAGGACTGAAGCTTCTTTAGCAAAGAAATTAAAAATTGATGTTCTGCCAGAAGTTGACAAAATTCAAAAGAGGAAAGATAGATTGTTGAAGAAGCAACACAGGCAAGCTCTCCTACTTGATAGCTTTGTGATTGCTGATGGAATATCTTCTGGAAGGTCCTTACGTGACAGAAAACCTGTAACCTACACCTTTGATGACTATGATAGGTCCATCAACGAGGCAATCAAGCTAACCAAGAAACGGCAAAATTCTCCGGAACAAGCTGTCAAGAGAGAACCTCTGTTTAAGCCTGATTCTAATGGCGAGTTAAACGGAGATCCTCAGGCCGCAGCACCTCCTGCATCTGATGCCCAATCCCCAAATCCCATGGAATATGAAGAAACCGATGATGATTTCCCTCTTAGCCCCCAAGACCGCAGCAACCGAAGAAAGAAGCGCCCTCAAAGATACTCTAACAAGGAATTTGTCGGCGCCGTTTCTGAAAACAGCCCTTACTTTGACAGCGACGATGACATAGTCGGAGAGGCTGTGTACGACGACGAGTACCTGAGGAGCAAAAAGCAGAGGGTCTCCAGCAGCTCTGAAGGCGACGAGGAGTACCGTTGGGAGGACAATGCGGAAGACGAGGACGAGTACGAGCAGGAGGAAGAAGATGAGGATTCACTGAGCATCAGCGAGGATTCGGTCGAGCGGCGGCAGTACAAGAAGCTCCGGCGCCGCGGCGGGCGAAGGGCAAGGCCGGGGCTGGACGACGAGCTCCAAAATGGGCTCAGGCGGAGCCAGAGGTCGACGAGGCCCCGCATAAATTACCAGCAGTACGAGCTTACGGATACTGACTCCGAGGAGTCGGAGAAGGCCAGTGACTCGAATGTGTCTGACGCGTCCTCGGATGCGATGAACGGCCTCAAGGCTTCTTCCGGTAGCAGGGACGGCAGCCCGGAGGACGAAGAATTGAACAACGAGAAAGCCGGTGTTGAACGTGTCGAGGGGGCAGCCGCCGAAGCCCCCCAATCCCTGCCCTTGGCGAAAGCTGGGAGCCCGTCGGAGGGAGGCGCCGTGCCCAGGAGGCGGTTCCTTGATCTCAATGAGCTCGCACCCGGAACCGGCTTCGAGGACGGGCCTAGCCCAATGAGCAAGGATGAACACGACAACTTCTAGGTATATATTTTATCATCTTCACTATGTTACCACCCACCCATTTTTTACTAGAAGTGCGCCCGGCAAGAGATATCGGAAGATCTCGCTTATCATGAAAACCGCCCGATTTGAGCTTCGGGCTGATGAATGGAGGTCATTGTATGGTTCATTGAGATCATTGCGGGGAAAGAGAGAGGAGGAGAGAGATCCCAAGGAATGTGTAGGATTTAGGGCTTAGGGTCCGCAATTGCCCTGTTTTTCGTTCTTGTCGGACCAAGCTTGATTTGTTTCTCGGTCAGGGCAACATTTTTAGGGGACTTCACTATTTATTATCCTCTTCTACTACACTCTTGGTGCCTTCCCACCCCCTTTATTTACCACATATAATTGATGGTCTCTGTAGAGAGGTTCAGGCATTAGTGATTTTTTATATAATAACAAAGTATGATGAGCCCTGTATTTTAATGTTCTGCTGCAAACTCAAAACTTATTTAAATTAGCCGTTCTATTGTGGAGTATTGAGCTTTTTTCCTTCTCTCTCATTAGAGGCTCTTATTATTATTTTTTTTAAGTGGAACGAAAGTTTGTATTTTTATCAATTTATAAATTAGTATATTAAGTAATGCTTATATGTATAACTAATAAACTATTTACTTTATTG

Network for GWHGAAEX005327

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02791.16	DDT	98	144	9.40E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	DDT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.440
SRP064423	SRR2545915	Juvenile tuber	22.110
SRP108465	SRR5643513	five period of Gastrodia elata	26.500
	SRR5643514	five period of Gastrodia elata	22.320
	SRR5643515	five period of Gastrodia elata	23.410
	SRR5643524	five period of Gastrodia elata	23.400
	SRR5643525	five period of Gastrodia elata	33.300
	SRR5643528	five period of Gastrodia elata	29.770
	SRR5643658	five period of Gastrodia elata	25.490
	SRR5643659	five period of Gastrodia elata	33.790
	SRR5643660	five period of Gastrodia elata	37.210
	SRR5643661	five period of Gastrodia elata	34.950
	SRR5643662	five period of Gastrodia elata	37.260
	SRR5643663	five period of Gastrodia elata	34.930
	SRR5643664	five period of Gastrodia elata	34.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.440
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	35.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.260
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.910
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	29.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.960
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	32.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	33.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.980
SRP279888	Gastro	Gastrodia elata tuber	24.84
	Juven	Juvenile tuber	32.63
	Mother_Gastro	Mother tuber of Gastrodia elata	27.37
	Mother_Juven	Mother tuber of Juvenile	28.77