Detail information of GWHGAAEX005330/evm.TU.scaffold_161.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743862645|ref|XP_010943591.1|2.42E-10PREDICTED: transcriptional regulator SUPERMAN-like [Elaeis guineensis]
Swissprottr|Q9FFX4|KNU_ARATH4.00E-06Zinc finger protein KNUCKLES
trEMBLtr|W1PF34|W1PF34_AMBTC2.00E-07Uncharacterized protein {ECO:0000313|EMBL:ERN06231.1}
TAIRAT3G538203.00E-06C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000166784000784425+
Transcript Sequence

Network for GWHGAAEX005330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_621471.40E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.570
SRR2545915Juvenile tuber3.210
SRP108465SRR5643513five period of Gastrodia elata0.690
SRR5643514five period of Gastrodia elata0.260
SRR5643515five period of Gastrodia elata0.640
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.530
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.310
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.630
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.290
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00