Detail information of GWHGAAEX005331/evm.TU.scaffold_161.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672182023|ref|XP_008811248.1|0PREDICTED: uncharacterized protein LOC103722459 [Phoenix dactylifera]
Swissprottr|Q9LDX1|SGS3_ARATH2.00E-11Protein SUPPRESSOR OF GENE SILENCING 3
trEMBLtr|M0S3D6|M0S3D6_MUSAM2.00E-157Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P26790_001}
TAIRAT3G224304.00E-115Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000166784523804123+
Transcript Sequence

Network for GWHGAAEX005331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03468.13XS3885217.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0031047Biological Processgene silencing by RNA

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.470
SRR2545915Juvenile tuber82.040
SRP108465SRR5643513five period of Gastrodia elata154.030
SRR5643514five period of Gastrodia elata130.670
SRR5643515five period of Gastrodia elata136.980
SRR5643524five period of Gastrodia elata122.820
SRR5643525five period of Gastrodia elata142.620
SRR5643528five period of Gastrodia elata115.850
SRR5643658five period of Gastrodia elata107.990
SRR5643659five period of Gastrodia elata179.190
SRR5643660five period of Gastrodia elata188.320
SRR5643661five period of Gastrodia elata191.510
SRR5643662five period of Gastrodia elata166.500
SRR5643663five period of Gastrodia elata158.030
SRR5643664five period of Gastrodia elata175.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1163.980
SRR6049655Rhizomagastrodiae_C368-T10_good_1179.600
SRR6049656Rhizomagastrodiae_C368-T07_good_1159.080
SRR6049657Rhizomagastrodiae_C368-T07_good_1168.610
SRR6049658Rhizomagastrodiae_C368-T04_good_1141.430
SRR6049659Rhizomagastrodiae_C368-T04_good_1154.330
SRR6049660Rhizomagastrodiae_C368-T01_good_1178.600
SRR6049661Rhizomagastrodiae_C368-T04_good_1143.010
SRR6049662Rhizomagastrodiae_C368-T01_good_1152.620
SRR6049663Rhizomagastrodiae_C368-T01_good_1158.880
SRR6049664Rhizomagastrodiae_C368-T10_good_1166.330
SRR6049665Rhizomagastrodiae_C368-T10_good_1166.330
SRP279888GastroGastrodia elata tuber 206.97
JuvenJuvenile tuber280.88
Mother_GastroMother tuber of Gastrodia elata 100.19
Mother_JuvenMother tuber of Juvenile 116.43