Gene detail

Detail information of GWHGAAEX005339/evm.TU.scaffold_161.39

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672186404\|ref\|XP_008813073.1\|	0	PREDICTED: rootletin [Phoenix dactylifera]
trEMBL	tr\|A0A061DQM7\|A0A061DQM7_THECC	3.00E-148	Kinase interacting (KIP1-like) family protein, putative {ECO:0000313\|EMBL:EOX94682.1}
TAIR	AT3G22790	5.00E-101	Kinase interacting (KIP1-like) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000166	1103537	1125942	-

Transcript Sequence
>GWHTAAEX005339 CTCAAATCCACAGAAAACCATTCACTTTTTTCCCGGTTTATTCGTAGAAGATTTCTCTCCAACATCTAGTCGCTCTCACCTTTTTCTGATTTGTTCCTTGCTCTCTTGTGCGTTTGCCGTTTCCCTTTTGGTTTCTCTGGAGAGAAAGGGTTTCTCTATGTGAAGGATACGGGCTAGTGGCGGGTAAGGGAAGCGGCTGCTCATTTTCAATCTTGAGCGGGTAAAACAGGCAGCTTGTCGGTACTGAATACCTTTTCTGTCTCTGGAGCAGTGTGATTAGATTTTCTTGCTGGATTCATGGCTACTTTTCCACATAATGATTCAAGGAGAATGTATTCGTGGTGGTGGGATAGTCATATCAACCCTAAAAACTCTAAATGGCTTCAAGAAAACTTAAATGACATGGACATTAGAGTTAAAGCAATGATCAAGCTTATAGAGGAAGATGCTGACTCTTTTGCAAGGAGAGCTGAGATGTACTACAAGAAACGGCCCGAGCTTATGAAACTTGTGGAGGAATTCTACCGAGCGTATCGTGCCTTGGCTGAAAGATATGATCATGCAACGAAAGCTCTTCGCCATGCCCATCGAACAATGTCCGAAGCATTTCCCAATCACGTCCCTCTTGCTTTGCCCGATGAATCTCTCTCCAATAACACTCTTGAAGTGCCGAAATCATTTAATGTTTTTGATGGGATTCAGCTGCCTGAAGAAAATGAAAACTTAGCAACTAAGAAAGGGTTAAAGTACTTTAATGAGATGATTCATCATCAAGATGTGGTGGCGCGCGTCAGATTACCTGAACGTACTGATGTGAAAGGTCTTAATATTGATGATGAAGATGAGGAAGATGTGGAAGATGAGGAAGAGATTACTGCTCGGGTGAGATTACCTGAGGTTAAGGCCAGGAATCTTGATTTTGAGGAGGAAGAAGAAGAGAGCTCACATACCAAAATTTATATTGATTCTAGCTATTCACAGCCAGAATTGATGGAGAACGATAATGTTAGGTATGGAGTAAAACATCTTCAAGAACAAGTTTCCCAATTATCAAGTGAGAACCAGATGTTTAAGACTCAGAAAGAGCTAGAATCCAAGAATTTGGATTTATCCAAAGCTGAAGTTCAGAACTTGAGAGCTGCGGTGTCCAAATTAGAATCTGAGAATGATGCTGCTATTCTTCAGATGCAGATATCCCATGAATGTATATCTGATTTGGAGAATGAAATTTCTAAGGTTAAAAATGAAATTAAGATGCTTAATGAAGAAAAGGAATTTGCTACCTCGAAGCTGAGTGGTGCTGAAAAGCAATGTCTTGCTTTGGAGAAGGCAAACCAGAGTTTGCAGTTAGAACAGGGAGAATTAAGAAAGCAGTTGGAAGAACTCAAACTTTCATTATTTGAGAGCAATATGAACTGTGAGGAGGCTGAAGCATCTCTCAAATCAAGTGAGCACCTGTATAGGCAGTCTAATGACAAGGTTATTCTTATGACATTGGAATTTCAAACTTTTGTTGAGAATTTAAAGGAAGTTGGACGCAGTAAAGTGGGTTTGGAGGTAGAAGTTTTTAAACTTAAAGATTTAAACCATACACTTGATGAACAGAACATGGCTTGTGCTTTGAAGTTGAAACACCTGGAAGATGAGCTAATTTCCTTGAAGGAAATAAATGGTAAATTAGAAGTTGAAATTGAAATTCAATCAGAGGAAAAGAAATTTATTCAGCAAGAGCTTGAGTCTCTGAGGGATGCCACAAATGAGATGAACCTGAAAAATCAAACTCTAACAAATGAATTTAAAGAAGCAGGCTTACTTATTGTATCACTAGAGACACATGTGAAAGACCTGCAATATGGCCATGCTGAAGTGAAGGAGTGCTGCAGTAAGCTTGAGGATGAGAAGCTGCTGCTTATTAACAAATTAAAGGATATGGACTCAGTTTATGAGAAAAATTCAGTCTTGGAGAACTCTTCATCCTTTACAAATGTGGAGCTTGAAGAGTTAAGAAAGAATGTAGAAGAGCTTGAAGGTTCATGTTTGTCACTAACTGCTGCAGTTTCTACTCATGTTGGGGAAAAGACTGCTCTCGCCTTTGAGAAAGAGATTCTTGTTGAAAATGTTGCGAAGCTTTCCGAAAAAAATATGTTACTGGAGAACTCTCTGGATGATGCAAATACTGAACTTGAAGGATTGCGCTCAAAATTGAGAGACTTGGAAGAGTCATGCCAATTTCTTTCTCATGTAAATTCAGATCTTGTTTCCAAAAAGAATAATTTAATCTCTGAGGTAGAGAACATTCAAAATAGCCTTGCAAATTTGGAGTCTACACATTCTACACTGGTAGAAAAGTATATGAACTTAGCAAAGGAAAAAGATCTATCTCTTAACAAAATTTTGAACCTTGAAAACTCATTGGGTGTTATGCAGAAAGAACATGAATCTCTAATTCACTCAAAGAATTTTAGCTTGGCCTCCCTAGAAGGACAGCTTCTTTGCTTGCAGGAAGATACACAGCTCAGGGAGGCGGAGTTGGAGGTTGAACAACAAAGGTGCTTGTCTCATATGACTGAAATATATGTCTTGCAGAGATGTCTTCATGATGCGTCAAATTCCTTGATAATTGAAAAGCAAAAGTACAAGTCCCTTGTCGTTTCCAGCATGCATCAACTGTCTGCTTTACAAAACCATATCCATCTCTTACAAGAAGAAAAACAGATCAAAGATAATAAAATTGAGGAAGAGGAGCAGAAATCCATAAACTCTATGCTTGAGGTTTTCATCTTGCAAAGATGCTTGACTGAAATGAAAATGGAAAATTTCAGACTCTTGCAGGAGTGTGAGAAGCATCTTGACTCCTCTAAATGTGCTAATGAACTAGTCAAACAGCTAGAAGAGAGGAAACTAGTTCAGAGGGGAAATATCACTGTATTAACCGAGCATATTTCAAAGGTTAGGGATGGCATCCAACTTTTGCTTGAATTGCTTAACATCAATAATGAGCTAATGAACTCTGAGAGAGGTGAAGTTGTCATGCTACCAATCATTCTCAGAGAGATTAAGAATCTGTTGGCTTCCAATTCGGATCTCCATGATGAATATCAACTTATATGTTTGGAGATATCGGTTTTCCTCAGCATTCTTAAGCAAAATGAACTTGAAAAATTTATCTTAATTCAGGATATTAAAAAAATAAACCTGCATTTACTTGCTCTACAGCAGGAGCACCATCTGCTTTTTGAAGAATATGAACAACTTTGCTATGACGCAAGTACGACAAACTTAACAAACATAATATTAAAAGCCGAACTAGAGTCTTCGATTTGTAAATTGATAGATTTGTCGGAAAATTTGTACAAATTGAAGGAAGAAATGAATGCTTTGGAAGAGGAAAACAGCTTAATGTGTGTGGAGGCTATGACACAGGAGAATATTTGCTTGTTCTATAGGAATCTAAATGCAGAAAACATGCAACAATTGAATATGCTTGGTGGTGACGTGAGATCTCTTCTTACTGCTAAGAGTGGCCTTGATGAGGAGATTAGCAGAAGTCAAGAGAGAGTGAGAGCCGTGGAAAGTGAAAACAAGCAGCTTAAGGAATCTCTTCTCTTGCTAGAAGACTTGAAAACCCGTATTATTGTTTTGGAATTCGATTTGTGCTCTTTTTCAGGTTTCTGTGAAGAACTGATTTTTCAAGTTGAAGCTGGAGAGAATTTGTTGGAGGAGAAAAGCATGGAGCTGTATAGAGTGAATGATATGCTTCTGTCTAAACAAGAAGAGCTTACTAAAGTGTGCAGAGAACTTGAGGCCTCGAACAAAGAGGTTGATGAGGTCAAAATCATGAGATCTGTGATAGATAATAAAATTGCTATTTTATTGGAAGGTACTTTCTGTAAAGATAAGCAAATTGCTAGTATTTACAGTGAAAATAGAGCTCTTACTGAGGTATTAAATACAGTTAAAGTTGAAATTGAAGAGCTGAAAATGAAAGAACATGATCTGTCATTTGAGCTTGAAGAAGAAAAGGAAGAGGTTGACCGGTGTGAGAAAGAGATCATAGATTTGGTCAGTGAACTTCAATCTTCTATGGTCAATGCCACAGTGTTCAATGAAAAGATGTTGGAGTTAGCATCTCAATGCGAGGGCCTTGAGATTTCTGAAAAAATACTTGTAGAGATTCTAAGGGAAGAGATTTTGTTAAAAGATGCACGTGCAGTTGAGCTGAAAATGAAGCTTGGTAATTTTGAAAATGAGAATGAAAAGCTTAGAAACAACCTGAGAGTGCTTTCTCCTCTTATTTTATCTTTAAGGAATGACATTTCACATTTGAAAGGGCATGTTTGTCAATTTGACGAGCTTGATGAATATCAGGAAAACTCAGCAGATCATCATCATGAGAATCATGAAACAAGCATCGATAATTGTGATCATTCTCCCATGATAGGAGTTTTAGATATGCAGAATATGATTGCCCTAGTTGAGGCGCTTCGAAAATCGGTACTTGCCGCCAAGGGTCGAACTGTAGAGGAAAGGCTTGAATCTGCTGCAATGCTAGAGTCAGCAAGAAATGAAATTGATGAGTTAAAGTTTAAGAATAGCTCCATCCAGGAAGAAACTCAAGGAAAAGAAGCCTCCAATATGGTAAAAGATATTGAACTTGATCAGGTGTCAAGCTCCTTCAATATGCTGACCAAGATTCAGAGCACCGAGTCCAACGATCAAATTCCCAAGTCATGGGAGCTGGATGGTACTGCTCAAAGCAACCCACTGTCAAATATCCATGACATAGATGCAGTGGGAGAAGAACCCAGGAGCGAGAAGCATTTGTTGGAGCCTGCAACGGAGAAAGTTGTTGGAGTTTATAAAACGGAAGAGTGGGGCAGGAGGGTCTTCAAAAGGCTTGCTTTTGATGCTGAGAAGCTCTCCATTCTTCGTTCCGTTGCCCAAGAGCTGAAGTTGAAGATGGATAAATCTCCCACGCGGAGGAATAGACAGCACTTTGATAGCCTCAGGGCAAAGTTGAAAGGGGCTGAAGAAGGCATTTCTGATTTGATTGATAGAAATGGAGAGCTGACAGCAATGGTAGAGTTTCATTTCAGTTCATTTAATGGGAAAGAGATGGGGCATGTTGAGAGAAGCCAAGTATTCGAACAAGCTCGCAGTGCGTCTAATAGTATTGAATTGCTGGAGCTAGAGTTGCAGAAGATTGATTACATCTTTCTGAAATTACAGGAAGAATGGCAGAACTATCCGGCCAGAGGGGCTGATCGAACTCGCAGAGTGATGCTAAGAGACTACCTTTATGGGAAAAAGGATAGGCTTAGAAGGAAGAAAGGCTATTTCTGTGGGTGCATAAGGCCAAGAACACAGGATAACTATTAATTGTGTCCTTCATTTTCCTTTCTTGTCTTTTAATTAAGCAATGGCAAGAAATGTTGTAAATATGCGAAGAACATGTAGAGGGGTGTAAGTTGTAGAATAACCTCTCTCGGTTCTCTCGCATTGATCTCGACTGTCCTTTATTTTTGTGCTTCGGTTTTGAGATTGCTGTGCTGTATACATAGTTTATGAGATTCTTTACTTGGGCCTAACCATAATGTTGGGTTGGGATAGGATACAGCTGAGCTATATGCATTGTTTGATGGTGTGTGTGCTTTTAGTATGCATTTATTGTTTGAATGCAGTGAAGCTACAATTCAAAAAAAATATAATGTTTGGAGTTATACATTTCAGTCTTCTCTATGTTGTTTGTGATTCATGAGAATTGTGTTCCCACACAATACATATTGATGAAGAAAATTCGG

Network for GWHGAAEX005339

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07765.11	KIP1	14	87	5.60E-37

Protein Sequence

>GWHPAAEX005339
MATFPHNDSRRMYSWWWDSHINPKNSKWLQENLNDMDIRVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATKALRHAHRTMSEAFPNHVPLALPDESLSNNTLEVPKSFNVFDGIQLPEENENLATKKGLKYFNEMIHHQDVVARVRLPERTDVKGLNIDDEDEEDVEDEEEITARVRLPEVKARNLDFEEEEEESSHTKIYIDSSYSQPELMENDNVRYGVKHLQEQVSQLSSENQMFKTQKELESKNLDLSKAEVQNLRAAVSKLESENDAAILQMQISHECISDLENEISKVKNEIKMLNEEKEFATSKLSGAEKQCLALEKANQSLQLEQGELRKQLEELKLSLFESNMNCEEAEASLKSSEHLYRQSNDKVILMTLEFQTFVENLKEVGRSKVGLEVEVFKLKDLNHTLDEQNMACALKLKHLEDELISLKEINGKLEVEIEIQSEEKKFIQQELESLRDATNEMNLKNQTLTNEFKEAGLLIVSLETHVKDLQYGHAEVKECCSKLEDEKLLLINKLKDMDSVYEKNSVLENSSSFTNVELEELRKNVEELEGSCLSLTAAVSTHVGEKTALAFEKEILVENVAKLSEKNMLLENSLDDANTELEGLRSKLRDLEESCQFLSHVNSDLVSKKNNLISEVENIQNSLANLESTHSTLVEKYMNLAKEKDLSLNKILNLENSLGVMQKEHESLIHSKNFSLASLEGQLLCLQEDTQLREAELEVEQQRCLSHMTEIYVLQRCLHDASNSLIIEKQKYKSLVVSSMHQLSALQNHIHLLQEEKQIKDNKIEEEEQKSINSMLEVFILQRCLTEMKMENFRLLQECEKHLDSSKCANELVKQLEERKLVQRGNITVLTEHISKVRDGIQLLLELLNINNELMNSERGEVVMLPIILREIKNLLASNSDLHDEYQLICLEISVFLSILKQNELEKFILIQDIKKINLHLLALQQEHHLLFEEYEQLCYDASTTNLTNIILKAELESSICKLIDLSENLYKLKEEMNALEEENSLMCVEAMTQENICLFYRNLNAENMQQLNMLGGDVRSLLTAKSGLDEEISRSQERVRAVESENKQLKESLLLLEDLKTRIIVLEFDLCSFSGFCEELIFQVEAGENLLEEKSMELYRVNDMLLSKQEELTKVCRELEASNKEVDEVKIMRSVIDNKIAILLEGTFCKDKQIASIYSENRALTEVLNTVKVEIEELKMKEHDLSFELEEEKEEVDRCEKEIIDLVSELQSSMVNATVFNEKMLELASQCEGLEISEKILVEILREEILLKDARAVELKMKLGNFENENEKLRNNLRVLSPLILSLRNDISHLKGHVCQFDELDEYQENSADHHHENHETSIDNCDHSPMIGVLDMQNMIALVEALRKSVLAAKGRTVEERLESAAMLESARNEIDELKFKNSSIQEETQGKEASNMVKDIELDQVSSSFNMLTKIQSTESNDQIPKSWELDGTAQSNPLSNIHDIDAVGEEPRSEKHLLEPATEKVVGVYKTEEWGRRVFKRLAFDAEKLSILRSVAQELKLKMDKSPTRRNRQHFDSLRAKLKGAEEGISDLIDRNGELTAMVEFHFSSFNGKEMGHVERSQVFEQARSASNSIELLELELQKIDYIFLKLQEEWQNYPARGADRTRRVMLRDYLYGKKDRLRRKKGYFCGCIRPRTQDNY

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003779	Molecular Function	actin binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	102.960
SRP064423	SRR2545915	Juvenile tuber	54.260
SRP108465	SRR5643513	five period of Gastrodia elata	19.890
	SRR5643514	five period of Gastrodia elata	19.130
	SRR5643515	five period of Gastrodia elata	15.380
	SRR5643524	five period of Gastrodia elata	17.640
	SRR5643525	five period of Gastrodia elata	47.830
	SRR5643528	five period of Gastrodia elata	38.040
	SRR5643658	five period of Gastrodia elata	61.360
	SRR5643659	five period of Gastrodia elata	21.920
	SRR5643660	five period of Gastrodia elata	24.490
	SRR5643661	five period of Gastrodia elata	18.980
	SRR5643662	five period of Gastrodia elata	18.380
	SRR5643663	five period of Gastrodia elata	20.980
	SRR5643664	five period of Gastrodia elata	23.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.110
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	47.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	39.210
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	39.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	23.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.140
SRP279888	Gastro	Gastrodia elata tuber	26.43
	Juven	Juvenile tuber	54.13
	Mother_Gastro	Mother tuber of Gastrodia elata	33.32
	Mother_Juven	Mother tuber of Juvenile	51.89