Detail information of GWHGAAEX005343/evm.TU.scaffold_161.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|512550210|ref|YP_008088116.1|2.00E-17Integral membrane protein, interacts with FtsH [Chthonomonas calidirosea T49]
KOGKOG23221.00E-70N-methyl-D-aspartate receptor glutamate-binding subunit
nrgi|573950410|ref|XP_006657498.1|1.98E-75PREDICTED: BI1-like protein-like [Oryza brachyantha]
Swissprottr|Q94A20|BI1L_ARATH5.00E-62BI1-like protein
trEMBLtr|T1NVS8|T1NVS8_TRIUA3.00E-77Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_34972-P1} (Fragment)
TAIRAT1G030701.00E-70Bax inhibitor-1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016611955931198016-
Transcript Sequence

Network for GWHGAAEX005343

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01027.19Bax1-I81561.80E-39
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.650
SRR2545915Juvenile tuber0.460
SRP108465SRR5643513five period of Gastrodia elata2.510
SRR5643514five period of Gastrodia elata4.400
SRR5643515five period of Gastrodia elata3.260
SRR5643524five period of Gastrodia elata3.020
SRR5643525five period of Gastrodia elata8.200
SRR5643528five period of Gastrodia elata5.270
SRR5643658five period of Gastrodia elata8.330
SRR5643659five period of Gastrodia elata1.470
SRR5643660five period of Gastrodia elata1.160
SRR5643661five period of Gastrodia elata0.900
SRR5643662five period of Gastrodia elata1.350
SRR5643663five period of Gastrodia elata2.190
SRR5643664five period of Gastrodia elata1.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.190
SRR6049655Rhizomagastrodiae_C368-T10_good_12.750
SRR6049656Rhizomagastrodiae_C368-T07_good_11.260
SRR6049657Rhizomagastrodiae_C368-T07_good_11.240
SRR6049658Rhizomagastrodiae_C368-T04_good_10.410
SRR6049659Rhizomagastrodiae_C368-T04_good_10.030
SRR6049660Rhizomagastrodiae_C368-T01_good_10.410
SRR6049661Rhizomagastrodiae_C368-T04_good_10.530
SRR6049662Rhizomagastrodiae_C368-T01_good_11.010
SRR6049663Rhizomagastrodiae_C368-T01_good_10.230
SRR6049664Rhizomagastrodiae_C368-T10_good_12.860
SRR6049665Rhizomagastrodiae_C368-T10_good_12.860
SRP279888GastroGastrodia elata tuber 1.05
JuvenJuvenile tuber1.27
Mother_GastroMother tuber of Gastrodia elata 10.29
Mother_JuvenMother tuber of Juvenile 2.38