Gene detail

Detail information of GWHGAAEX005346/evm.TU.scaffold_161.49

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672188102\|ref\|XP_008813500.1\|	PREDICTED: LOW QUALITY PROTEIN: ETO1-like protein 1 [Phoenix dactylifera]
Swissprot	tr\|Q9ZQX6\|ETOL1_ARATH	ETO1-like protein 1
trEMBL	tr\|M0SQS7\|M0SQS7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P21140_001}
TAIR	AT4G02680	ETO1-like 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000166	1428125	1432879	-

Transcript Sequence
>GWHTAAEX005346 ATGAGGAACTTCTTTCATGTTGATACCTGCAAAGAAACACAAGTTCATACTTTTTATCCTCAGTCATGGCTTCAGGTGGAGAGGGGAAAGCTTTCCAAGTTCTCCTCTCACTCGCCTTCTTCTATAGAATCCCTTATCAAAGTTACAGAGCCTCCTGTTCTCCCTTACTTCAAGCCGATTGACTATGTGGAGGTCTTGGCACAGATCCATGAAGAACTTGAATCATGCTTGCCTCATGAGAAATCAGAGGTATACTTGATACAATTTCAAGTATTTAGGGGACTTGGGGAGCTTACGCTGCTTCAAAGGAGCCTGCATTCTGCTTGGGAAACGGCGAGCACAGTTTATGAGAAGCTGATTTTTGGAGCATGGCTTAAGTATGAGAAAAAAGGAGAAGAGCCTATCTCCGATCTCCTTGCATCATGTGGGAAATGTTCTCAGGAATTCAGGATTCTTGGTGCTGCACCTGAAATCCATCCTCAGGGTTCTGAGGCAATGGCCTCTTGTAATTCAGCTAAAATCGAGCCGTCCAATGCTGTGTTCTTCAGTGTAAGAGAAGAGTATATAGCGTGTGATCGGGAAAAGATGGCAGATTTGTCACCTCCATTCCACACGATGCTCAATGGATGTTTCAGTGAGTCATTTCAAGAAGTAATAGATATGTCTCATAATAACATCTCACCCTCAGGTATGAGAGCAATTTGCAACTTTAGTCTCACAGGGGGTTTGCATGATTTGCTATCCCTGGATATTTTGTTAGAAATATTGATATTTGCTAATAAATTCTGCTGTGAAGTACTCAAAGAGGCATGCGATAGAAAGCTGGCATCTTTGGTTTCATCGAGGCAGGACGCTGTGGACCTTATGGAGTGTGCACTAGAGGAAAATTCTCCAGTGCTTGCAGCATCTTGTTTGAAGTTTTTCCTATGGGATCTTCCCGATTGTATAAATGATGAACAAGTTGTAAGAATCTTTTCCACCGCTAATGAGCATCAGAGATTCATCATGGCTGGACATGCTTCGTTCTCGCTCTACTGTGTGCTAAGTGAAGTTTCATTGAATGCTAATCCGAAGTCCGATGTCACTGCCGCCTTTCTGGAGAAGTTGGTAGACTCTTCTGTAACTTGCAGGCAGAAGCAGATAGCCTTTCATCAGCTTGCTTGCGTGAGACTTCTGCGAAAGGAATATGATGAAGCGGAGCGCCTTTTTGATGCTGCAATTGCTGCAGGGCACATTTACTCTGTTGTTGGTTTAGCCAGAGTTGCTTGCTTTAAGGGTGATAAGCACTCATCATATGAGAAGCTCAGCACTGTGATTTCTTCTTATAATTCTCTTGGCTGGATGTACCAAGAGAGGTCCTTGTACACTGAGGGGGACAGAAAATGGGAAGACCTTGACAAGGCAACTGAGTTGGATCCCACTCTTCTTTATCCTTACATGTTTCGAGCATCATTCTTGATGAAAAGGCAAAGTGCGGAGACAGCTCTAATGGAAATTAACCGCATTTTGGGCTTCAAATTGGCTTTAGAATGTTTAGAACTTCGATTTTGCTTCTATTTGGCTGTTGAAGATTATAGAGCTGCCCTACGTGATGTACAAGCGATCCTTACTTTGGATCCAGATTATCAAATGCTTGAAGGGCGTGTGGCTTCTTCTAAGATGAGAACACTTGTTCAAGAACATGTTGAGCAGTGGACAACAGCAGACTGCTGGCTTCAGCTTTATGAGCGGTGGTCAGCAGTGGATGATATCGGATCTCTTTCAGTTATCTTTCAAATGCTTGAGGCAACAGATGCTGCAAAAGGAGTTTTGTACTTTAGGCAGTCCTTGCTTCTTCTCAGGTTGAATTGTCCGGAAGCTGCAATGCGAAGCTTGCAGCTTGCACGTCAGCATGCAGCCAGTGAGCATGACCGTTTAGTTTACGAGGGATGGATTTTATATGATACCGGTCATTGTGAGGAAGGGCTTCACAAAGCTGAGGAGTCCATTTCCATCCAAAGATCTTTCGAGGCATTTTTTTTGAAAGCGTATGCCCTGGCAGATTCAAGCCCCGACCCGTCATGCTCTGCGACTGTTATCTCTCTTCTCGAAGATGCACTGAGGTGCCCTTCAGATAGGCTTCGAAAGGGTCAGGCACTGAACAACCTTGGTAGCGTATATGTCGATTGCGGGAAGCTCGATCTTGCTGCAGATTGCTATATAAGCGCTCTCAAGATTCAGCACACCAGAGCCCACCAAGGACTGGCTCGCGTTCATTTCCTCAAGAATAATCGAACTTCGGCTTACGAGGAGATGACCAAGTTGATAGAGAAAGCCAGAAACACTGCTTCAGCATACGAGAAGAGGTCTGAGTACTGTGACCGCGAGCTAACGAAAGCAGATCTTCAAATGGTGACAAAATTGGACCCGCTGCGGGTTTATCCATACAGATATAGAGCTGCAGTTCTGATGGATAGCCACAAGGAGGCTGAGGCAATAGCCGAGCTCACGAGGGCGATTGCCTTCAAAGCCGACCTCCACCTACTCCATCTAAGGGCTGCCTTTCATGAGCATATAGGAGATGTAGCCAGCGCCCTTCGGGATTGTAGGGCTGCCCTCTCAGTGGACCCCAACCACCAGGAGATGCTTGAGCTTCACAACAGAGTAAACAGCCAAGAACCATGA

Network for GWHGAAEX005346

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Ubiquitin Family	BTB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	73.940
SRP064423	SRR2545915	Juvenile tuber	69.600
SRP108465	SRR5643513	five period of Gastrodia elata	69.600
	SRR5643514	five period of Gastrodia elata	68.720
	SRR5643515	five period of Gastrodia elata	64.160
	SRR5643524	five period of Gastrodia elata	61.820
	SRR5643525	five period of Gastrodia elata	67.390
	SRR5643528	five period of Gastrodia elata	54.710
	SRR5643658	five period of Gastrodia elata	56.380
	SRR5643659	five period of Gastrodia elata	57.820
	SRR5643660	five period of Gastrodia elata	55.420
	SRR5643661	five period of Gastrodia elata	55.340
	SRR5643662	five period of Gastrodia elata	53.540
	SRR5643663	five period of Gastrodia elata	51.790
	SRR5643664	five period of Gastrodia elata	52.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	64.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	69.910
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	66.010
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	58.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	67.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	68.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	62.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	62.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	71.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	75.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	86.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	86.050
SRP279888	Gastro	Gastrodia elata tuber	64.24
	Juven	Juvenile tuber	36.52
	Mother_Gastro	Mother tuber of Gastrodia elata	108.55
	Mother_Juven	Mother tuber of Juvenile	48.10