Detail information of GWHGAAEX005350/evm.TU.scaffold_161.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186683200|ref|YP_001866396.1|3.00E-31signal transduction protein [Nostoc punctiforme PCC 73102]
KOGKOG00278.00E-76Calmodulin and related proteins (EF-Hand superfamily)
nrgi|743774547|ref|XP_010917630.1|3.05E-82PREDICTED: calmodulin-like protein 11 [Elaeis guineensis]
Swissprottr|P17928|CALM_MEDSA9.00E-77Calmodulin
trEMBLtr|M5XFI3|M5XFI3_PRUPE1.00E-79Uncharacterized protein {ECO:0000313|EMBL:EMJ24877.1}
TAIRAT3G568008.00E-76calmodulin 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016616747191676262-
Transcript Sequence

Network for GWHGAAEX005350

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_710712.20E-16
PF13499.5EF-hand_7811442.30E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.660
SRR2545915Juvenile tuber17.960
SRP108465SRR5643513five period of Gastrodia elata28.450
SRR5643514five period of Gastrodia elata7.010
SRR5643515five period of Gastrodia elata16.720
SRR5643524five period of Gastrodia elata4.570
SRR5643525five period of Gastrodia elata26.210
SRR5643528five period of Gastrodia elata4.530
SRR5643658five period of Gastrodia elata4.650
SRR5643659five period of Gastrodia elata9.110
SRR5643660five period of Gastrodia elata14.340
SRR5643661five period of Gastrodia elata7.920
SRR5643662five period of Gastrodia elata2.020
SRR5643663five period of Gastrodia elata0.430
SRR5643664five period of Gastrodia elata6.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.740
SRR6049655Rhizomagastrodiae_C368-T10_good_137.410
SRR6049656Rhizomagastrodiae_C368-T07_good_121.880
SRR6049657Rhizomagastrodiae_C368-T07_good_121.130
SRR6049658Rhizomagastrodiae_C368-T04_good_122.120
SRR6049659Rhizomagastrodiae_C368-T04_good_121.450
SRR6049660Rhizomagastrodiae_C368-T01_good_119.360
SRR6049661Rhizomagastrodiae_C368-T04_good_122.330
SRR6049662Rhizomagastrodiae_C368-T01_good_110.000
SRR6049663Rhizomagastrodiae_C368-T01_good_127.370
SRR6049664Rhizomagastrodiae_C368-T10_good_146.740
SRR6049665Rhizomagastrodiae_C368-T10_good_146.740
SRP279888GastroGastrodia elata tuber 19.12
JuvenJuvenile tuber108.83
Mother_GastroMother tuber of Gastrodia elata 316.58
Mother_JuvenMother tuber of Juvenile 135.62