Detail information of GWHGAAEX005356/evm.TU.scaffold_161.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|645235265|ref|XP_008224186.1|1.00E-07PREDICTED: auxin-induced protein IAA4-like [Prunus mume]
Swissprottr|Q5VRD1|IAA1_ORYSJ3.00E-08Auxin-responsive protein IAA1
trEMBLtr|M5XPL7|M5XPL7_PRUPE4.00E-08Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIRAT5G437001.00E-07AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016618613181872432-
Transcript Sequence

Network for GWHGAAEX005356

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA2823209.20E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.500
SRR2545915Juvenile tuber10.640
SRP108465SRR5643513five period of Gastrodia elata12.010
SRR5643514five period of Gastrodia elata28.350
SRR5643515five period of Gastrodia elata22.110
SRR5643524five period of Gastrodia elata22.540
SRR5643525five period of Gastrodia elata36.110
SRR5643528five period of Gastrodia elata29.070
SRR5643658five period of Gastrodia elata95.610
SRR5643659five period of Gastrodia elata28.670
SRR5643660five period of Gastrodia elata16.420
SRR5643661five period of Gastrodia elata19.850
SRR5643662five period of Gastrodia elata24.830
SRR5643663five period of Gastrodia elata22.090
SRR5643664five period of Gastrodia elata18.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.680
SRR6049655Rhizomagastrodiae_C368-T10_good_118.270
SRR6049656Rhizomagastrodiae_C368-T07_good_130.660
SRR6049657Rhizomagastrodiae_C368-T07_good_130.570
SRR6049658Rhizomagastrodiae_C368-T04_good_112.170
SRR6049659Rhizomagastrodiae_C368-T04_good_16.060
SRR6049660Rhizomagastrodiae_C368-T01_good_122.540
SRR6049661Rhizomagastrodiae_C368-T04_good_121.650
SRR6049662Rhizomagastrodiae_C368-T01_good_130.120
SRR6049663Rhizomagastrodiae_C368-T01_good_116.970
SRR6049664Rhizomagastrodiae_C368-T10_good_124.300
SRR6049665Rhizomagastrodiae_C368-T10_good_124.300
SRP279888GastroGastrodia elata tuber 50.95
JuvenJuvenile tuber30.42
Mother_GastroMother tuber of Gastrodia elata 8.50
Mother_JuvenMother tuber of Juvenile 7.81