Detail information of GWHGAAEX005368/evm.TU.scaffold_161.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410660438|ref|YP_006912809.1|2.00E-30Prohibitin [Dehalobacter sp. CF]
KOGKOG30832.00E-162Prohibitin
nrgi|743873851|ref|XP_010906930.1|0PREDICTED: prohibitin-3, mitochondrial-like [Elaeis guineensis]
Swissprottr|O04331|PHB3_ARATH6.00E-163Prohibitin-3, mitochondrial
trEMBLtr|F6I5L8|F6I5L8_VITVI2.00E-173Putative uncharacterized protein {ECO:0000313|EMBL:CCB62236.1}
TAIRAT5G407702.00E-162prohibitin 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016622432152273980-
Transcript Sequence

Network for GWHGAAEX005368

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01145.24Band_7362131.60E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.960
SRR2545915Juvenile tuber34.370
SRP108465SRR5643513five period of Gastrodia elata62.880
SRR5643514five period of Gastrodia elata60.700
SRR5643515five period of Gastrodia elata60.170
SRR5643524five period of Gastrodia elata69.090
SRR5643525five period of Gastrodia elata39.660
SRR5643528five period of Gastrodia elata52.520
SRR5643658five period of Gastrodia elata32.120
SRR5643659five period of Gastrodia elata73.220
SRR5643660five period of Gastrodia elata69.090
SRR5643661five period of Gastrodia elata75.350
SRR5643662five period of Gastrodia elata67.200
SRR5643663five period of Gastrodia elata58.230
SRR5643664five period of Gastrodia elata52.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.010
SRR6049655Rhizomagastrodiae_C368-T10_good_1144.950
SRR6049656Rhizomagastrodiae_C368-T07_good_185.250
SRR6049657Rhizomagastrodiae_C368-T07_good_155.860
SRR6049658Rhizomagastrodiae_C368-T04_good_156.130
SRR6049659Rhizomagastrodiae_C368-T04_good_148.870
SRR6049660Rhizomagastrodiae_C368-T01_good_171.640
SRR6049661Rhizomagastrodiae_C368-T04_good_156.090
SRR6049662Rhizomagastrodiae_C368-T01_good_181.040
SRR6049663Rhizomagastrodiae_C368-T01_good_186.800
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.640
SRP279888GastroGastrodia elata tuber 59.16
JuvenJuvenile tuber74.83
Mother_GastroMother tuber of Gastrodia elata 51.75
Mother_JuvenMother tuber of Juvenile 67.39