Detail information of GWHGAAEX005382/evm.TU.scaffold_162.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|283779091|ref|YP_003369846.1|6.00E-84AAA ATPase [Pirellula staleyi DSM 6068]
KOGKOG18030DNA helicase
nrgi|743876230|ref|XP_010907535.1|0PREDICTED: DNA-binding protein SMUBP-2 isoform X1 [Elaeis guineensis]
Swissprottr|Q9FJR0|RENT1_ARATH1.00E-34Regulator of nonsense transcripts 1 homolog
trEMBLtr|W1PVD6|W1PVD6_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERN11784.1}
TAIRAT2G032700DNA-binding protein, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015613007211357643-
Transcript Sequence

Network for GWHGAAEX005382

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13086.5AAA_111683822.40E-61
PF13087.5AAA_123914501.50E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.430
SRR2545915Juvenile tuber20.740
SRP108465SRR5643513five period of Gastrodia elata10.790
SRR5643514five period of Gastrodia elata11.150
SRR5643515five period of Gastrodia elata11.930
SRR5643524five period of Gastrodia elata11.920
SRR5643525five period of Gastrodia elata9.900
SRR5643528five period of Gastrodia elata13.210
SRR5643658five period of Gastrodia elata15.100
SRR5643659five period of Gastrodia elata15.520
SRR5643660five period of Gastrodia elata16.800
SRR5643661five period of Gastrodia elata16.090
SRR5643662five period of Gastrodia elata16.540
SRR5643663five period of Gastrodia elata17.920
SRR5643664five period of Gastrodia elata19.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.970
SRR6049655Rhizomagastrodiae_C368-T10_good_111.440
SRR6049656Rhizomagastrodiae_C368-T07_good_114.350
SRR6049657Rhizomagastrodiae_C368-T07_good_113.000
SRR6049658Rhizomagastrodiae_C368-T04_good_117.410
SRR6049659Rhizomagastrodiae_C368-T04_good_118.730
SRR6049660Rhizomagastrodiae_C368-T01_good_116.720
SRR6049661Rhizomagastrodiae_C368-T04_good_116.640
SRR6049662Rhizomagastrodiae_C368-T01_good_112.590
SRR6049663Rhizomagastrodiae_C368-T01_good_115.740
SRR6049664Rhizomagastrodiae_C368-T10_good_113.450
SRR6049665Rhizomagastrodiae_C368-T10_good_113.450
SRP279888GastroGastrodia elata tuber 19.58
JuvenJuvenile tuber11.56
Mother_GastroMother tuber of Gastrodia elata 9.63
Mother_JuvenMother tuber of Juvenile 8.89