Detail information of GWHGAAEX005391/evm.TU.scaffold_163.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00484.00E-29Transcription factor, Myb superfamily
nrgi|693302198|gb|AIS35918.1|1.90E-57MYB transcription factor 1 [Phalaenopsis equestris]
Swissprottr|Q38850|MYB5_ARATH1.00E-29Transcription repressor MYB5
trEMBLtr|A0A096ZX30|A0A096ZX30_PHAEQ7.00E-58MYB transcription factor 1 {ECO:0000313|EMBL:AIS35918.1}
TAIRAT3G135404.00E-29myb domain protein 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015911316+
Transcript Sequence

Network for GWHGAAEX005391

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding10553.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.120
SRR2545915Juvenile tuber0.300
SRP108465SRR5643513five period of Gastrodia elata0.430
SRR5643514five period of Gastrodia elata0.110
SRR5643515five period of Gastrodia elata0.130
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.440
SRR5643528five period of Gastrodia elata0.290
SRR5643658five period of Gastrodia elata0.110
SRR5643659five period of Gastrodia elata0.350
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.130
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.110
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.230
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 5.05
Mother_JuvenMother tuber of Juvenile 3.18