Detail information of GWHGAAEX005404/evm.TU.scaffold_163.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07241.00E-87Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nrgi|157043074|gb|ABV02070.1|9.25E-112transcription factor 1R-MYB1 [Chimonanthus praecox]
Swissprottr|Q6R0H0|RVE3_ARATH3.00E-88Protein REVEILLE 3
trEMBLtr|A7Y230|A7Y230_9MAGN3.00E-112Transcription factor 1R-MYB1 {ECO:0000313|EMBL:ABV02070.1}
TAIRAT1G015201.00E-87Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000159370067415613-
Transcript Sequence

Network for GWHGAAEX005404

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding35791.90E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.800
SRR2545915Juvenile tuber40.590
SRP108465SRR5643513five period of Gastrodia elata15.140
SRR5643514five period of Gastrodia elata14.770
SRR5643515five period of Gastrodia elata18.060
SRR5643524five period of Gastrodia elata15.980
SRR5643525five period of Gastrodia elata2.410
SRR5643528five period of Gastrodia elata1.430
SRR5643658five period of Gastrodia elata1.230
SRR5643659five period of Gastrodia elata30.020
SRR5643660five period of Gastrodia elata36.410
SRR5643661five period of Gastrodia elata26.760
SRR5643662five period of Gastrodia elata24.100
SRR5643663five period of Gastrodia elata29.150
SRR5643664five period of Gastrodia elata31.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.630
SRR6049655Rhizomagastrodiae_C368-T10_good_118.900
SRR6049656Rhizomagastrodiae_C368-T07_good_115.920
SRR6049657Rhizomagastrodiae_C368-T07_good_130.990
SRR6049658Rhizomagastrodiae_C368-T04_good_124.630
SRR6049659Rhizomagastrodiae_C368-T04_good_122.000
SRR6049660Rhizomagastrodiae_C368-T01_good_122.810
SRR6049661Rhizomagastrodiae_C368-T04_good_121.260
SRR6049662Rhizomagastrodiae_C368-T01_good_18.050
SRR6049663Rhizomagastrodiae_C368-T01_good_17.860
SRR6049664Rhizomagastrodiae_C368-T10_good_16.480
SRR6049665Rhizomagastrodiae_C368-T10_good_16.480
SRP279888GastroGastrodia elata tuber 41.05
JuvenJuvenile tuber32.91
Mother_GastroMother tuber of Gastrodia elata 1.48
Mother_JuvenMother tuber of Juvenile 14.77