Gene detail

Detail information of GWHGAAEX005428/evm.TU.scaffold_163.40

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	4.00E-126	Aspartyl protease
nr	gi\|700257095\|gb\|AIU50163.1\|	0	aspartyl protease family protein, partial [Iris japonica]
Swissprot	tr\|Q9LX20\|ASPL1_ARATH	5.00E-90	Aspartic proteinase-like protein 1 (Precursor)
trEMBL	tr\|A0A097PQ67\|A0A097PQ67_9ASPA	0	Aspartyl protease family protein {ECO:0000313\|EMBL:AIU50163.1} (Fragment)
TAIR	AT2G17760	4.00E-126	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000159	1105689	1123193	+

Transcript Sequence
>GWHTAAEX005428 TAAACCTTAGCCATCAAATATTATATTTTGGACAAAGCAAAAATATTAAGGTGGCGGGTGCATGCCTCTTCCCAAACCAAGGTTGGTCAAACTAGCCATGGGCTCCGTCCCATCGAATCGCCGGACACGCCGCCGCAGATAAATCATTCATCGGTGACTACTGCCATCATTTAATCAACGTCAACCACGCGTCGTCCCTCCCTTTTTCTACGCGCAGGCTTCATTTTGCGGCAGGGTTCCCAAAAAGTTCGATTCTCTTCTCCTTCTTTCTTCTTCCCCCATGGCCGCCTCTCCTTCCTCCTTTGCCACTTCTTCCCACTGCCTCATGTTCTTCTTATGCCTGCTGCCGTTTTTGTCACCGGGTGAGAGTTATGCATCGCCAACGCTTGGCTTCAACATGTACCACCGATTCTCCGATCGAGTTTGGCAGTGGGCGAAGTCGAGGCCACGGGATTTGCCCGGCGGGTGGCCCGAGAAGGATACTGCGGAGTACTACGCCGCCCTTGTGAATCATGACCGCGGCAGATCTCTCGTCGAGACGACTCCTCTGCTGGCCTTCGCAGATGGGAATGATACCCTCAGGATTAATTCGCTCGGATTCTTGCATTATGCTTTTGTTTCTCTGGGGACTCCTAATGTCTCGTTTCTTGTGGCGTTGGATACCGGGAGCAATTTGTTCTGGGTGCCCTGTGATTGTACCAGCTGTGCGCCAACTAGTTCTGATAGCTACGGTTTGCAGGGAAATGACATGAATATATACAGTCCCAGTCAGTCTAGAACCAGCCAAAGCATTTTTTGCAACAGTACATTATGTGATTTTCATAAACAAAACAATTGTCAGGAAGGGGAGGACTTCTGTCATTACTCAGTCGAATATGTTTCTGCTCAGACATCATCTTCAGGCTTCTTAGTGACTGATGTCTTGTACCTTACCACAGAAGATAGCAATTCTAAGATTGTCAAGGCACCCGTGGTGTTTGGGTGTGGACAGATTCAGACTGGTTCATTTTTGGGTGATGCTGCTCCAAACGGCCTTTTTGGGCTTGGTATGGATGACTTGTCAGTTCCTAGCATTTTATCAAGTAGGGGCCTAATGCCAAATTCATTTTCGATGTGCTTCGGCCGCTATGGCGTTGGGAGGCTTAATTTTGGAGATCAAGGAAGCTCAGATCAACAGGAAACCCCTTTTAATGTCAATCAGCAAAATTCCATATATAATATCAACTTCACCGGAATTGAGGTTGGTGACAGTTTCACGGATTTAAGTTTTAGCGCTCTAGTTGATTCGGGCACTTCATTCACAACGCTGGCTGGTCCTGCTTACACAGTGCTCTCTGATAGCTTTGATGCGGAGGTTAAAGAACAACGAGCGATTGTTGACTCAAGCATCCCTTTTGAGTACTGCTATTACCTCAGTTCTAATGAATCTGTGACCCATTTACCTGTTATTAATTTCAACACTCTAGGCGGAGGCAAATTTCCTGTTAATTACCCTGTAATTTTCATATCCAATCAGAATCAGCGTGATATTATGTATTGCTTGGCTCTTGTCAAGAGCAGCGCGCTAAGCATCGTTGGCCAGAATTTCTTAACCGGCCTTCGCGTTGTGTTTGATCGCGAGAGAATGGTTCTGGGCTGGAAGAAATCTAATTGCTATGATACGGAGGAATCCAATGCCTTTCCAGTAAAGCCCCAAAACTCTTCAGCAGCGCCTCCGTCAGCTTCTGCTTTGGAGCCGAACGGTTACATTCCCGAAGCCACAAAACAGACTGAAAATAATACTCAGGTGGCAGAATTGTCACCTTCAAGCAGTCATTCCTTGAAATTCAATCGCTTCACATGCATCTTCGCCCTTACATTTTCTCTACTCCCTATTGGCAACTCTTTGATCAACATTTTCCCGTCCTCTTGCTGATACATAAATTAGAGTTTTCTCTAATTTTGCAGTCCATACTTTATCTATGCATATACATATAAATACAAATGCATATAAATATATATGTATATTTATATATAGAGATAGATTGTTATGATACTATATGAAGAAGAGCACTATCTTTTTTTACATTGAGAACCGGCTATTGCTTGATCTATGCTGCACACAGATTAAAGTAACATCACCTGACGTGATATTGTCTTGCAAGATGTTTTAATATAGATCAAGTGATAAATGTTGTGCAAAAGGAAGTGTTCTTTTCCATATAAATAAATATTTATATATAGAGAGAGAGAGGGTCAGTTTTTTTTTTCAAATCTCTTAATTAATTTCTCAATTGCCATGTATCTGAACAGTGCCTGTAAATATGTGATTTGCAATAAAATTTTTATAGGTTGTATTTAAGTCTTATGTAATAATATTTTTTGTGTGGAAGTGATGTATGTTTTTGTGC

Network for GWHGAAEX005428

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	112	292	1.30E-34
PF14541.5	TAXi_C	312	454	6.80E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.080
SRP064423	SRR2545915	Juvenile tuber	37.150
SRP108465	SRR5643513	five period of Gastrodia elata	24.100
	SRR5643514	five period of Gastrodia elata	18.980
	SRR5643515	five period of Gastrodia elata	44.010
	SRR5643524	five period of Gastrodia elata	24.810
	SRR5643525	five period of Gastrodia elata	67.440
	SRR5643528	five period of Gastrodia elata	82.220
	SRR5643658	five period of Gastrodia elata	50.980
	SRR5643659	five period of Gastrodia elata	40.100
	SRR5643660	five period of Gastrodia elata	32.070
	SRR5643661	five period of Gastrodia elata	41.030
	SRR5643662	five period of Gastrodia elata	42.970
	SRR5643663	five period of Gastrodia elata	33.790
	SRR5643664	five period of Gastrodia elata	38.990
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.780
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.660
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.040
SRP279888	Gastro	Gastrodia elata tuber	26.76
	Juven	Juvenile tuber	25.95
	Mother_Gastro	Mother tuber of Gastrodia elata	53.83
	Mother_Juven	Mother tuber of Juvenile	57.55