Detail information of GWHGAAEX005436/evm.TU.scaffold_163.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17229243|ref|NP_485791.1|3.00E-111hypothetical protein all1751 [Nostoc sp. PCC 7120]
KOGKOG27436.00E-140Cobalamin synthesis protein
nrgi|695030984|ref|XP_009402984.1|0PREDICTED: COBW domain-containing protein 1-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0T380|M0T380_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P01320_001}
TAIRAT1G804806.00E-140plastid transcriptionally active 17

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015912266181288492-
Transcript Sequence

Network for GWHGAAEX005436

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02492.18cobW782634.50E-56
PF07683.13CobW_C3234171.20E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.840
SRR2545915Juvenile tuber17.590
SRP108465SRR5643513five period of Gastrodia elata13.580
SRR5643514five period of Gastrodia elata18.180
SRR5643515five period of Gastrodia elata12.440
SRR5643524five period of Gastrodia elata13.720
SRR5643525five period of Gastrodia elata1.290
SRR5643528five period of Gastrodia elata0.620
SRR5643658five period of Gastrodia elata0.430
SRR5643659five period of Gastrodia elata12.360
SRR5643660five period of Gastrodia elata16.970
SRR5643661five period of Gastrodia elata12.970
SRR5643662five period of Gastrodia elata13.310
SRR5643663five period of Gastrodia elata9.610
SRR5643664five period of Gastrodia elata11.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.620
SRR6049655Rhizomagastrodiae_C368-T10_good_116.570
SRR6049656Rhizomagastrodiae_C368-T07_good_113.280
SRR6049657Rhizomagastrodiae_C368-T07_good_110.610
SRR6049658Rhizomagastrodiae_C368-T04_good_18.270
SRR6049659Rhizomagastrodiae_C368-T04_good_16.240
SRR6049660Rhizomagastrodiae_C368-T01_good_111.490
SRR6049661Rhizomagastrodiae_C368-T04_good_110.260
SRR6049662Rhizomagastrodiae_C368-T01_good_120.890
SRR6049663Rhizomagastrodiae_C368-T01_good_115.410
SRR6049664Rhizomagastrodiae_C368-T10_good_118.000
SRR6049665Rhizomagastrodiae_C368-T10_good_118.000
SRP279888GastroGastrodia elata tuber 14.71
JuvenJuvenile tuber11.60
Mother_GastroMother tuber of Gastrodia elata 2.01
Mother_JuvenMother tuber of Juvenile 4.24