Detail information of GWHGAAEX005441/evm.TU.scaffold_163.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30644.00E-104RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger
nrgi|743764478|ref|XP_010912446.1|1.64E-151PREDICTED: protein MAK16 homolog [Elaeis guineensis]
trEMBLtr|M0RGS9|M0RGS9_MUSAM4.00E-148Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P09530_001}
TAIRAT1G232804.00E-104MAK16 protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015914072161417856-
Transcript Sequence

Network for GWHGAAEX005441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01778.16Ribosomal_L28e61182.70E-39
PF04874.13Mak161382248.70E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.170
SRR2545915Juvenile tuber27.590
SRP108465SRR5643513five period of Gastrodia elata22.650
SRR5643514five period of Gastrodia elata21.310
SRR5643515five period of Gastrodia elata22.710
SRR5643524five period of Gastrodia elata19.170
SRR5643525five period of Gastrodia elata16.430
SRR5643528five period of Gastrodia elata26.500
SRR5643658five period of Gastrodia elata17.300
SRR5643659five period of Gastrodia elata31.330
SRR5643660five period of Gastrodia elata25.880
SRR5643661five period of Gastrodia elata27.810
SRR5643662five period of Gastrodia elata30.430
SRR5643663five period of Gastrodia elata25.850
SRR5643664five period of Gastrodia elata19.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.840
SRR6049655Rhizomagastrodiae_C368-T10_good_118.580
SRR6049656Rhizomagastrodiae_C368-T07_good_130.230
SRR6049657Rhizomagastrodiae_C368-T07_good_123.150
SRR6049658Rhizomagastrodiae_C368-T04_good_125.880
SRR6049659Rhizomagastrodiae_C368-T04_good_124.380
SRR6049660Rhizomagastrodiae_C368-T01_good_126.770
SRR6049661Rhizomagastrodiae_C368-T04_good_124.690
SRR6049662Rhizomagastrodiae_C368-T01_good_133.040
SRR6049663Rhizomagastrodiae_C368-T01_good_131.250
SRR6049664Rhizomagastrodiae_C368-T10_good_132.270
SRR6049665Rhizomagastrodiae_C368-T10_good_132.270
SRP279888GastroGastrodia elata tuber 30.24
JuvenJuvenile tuber14.96
Mother_GastroMother tuber of Gastrodia elata 24.28
Mother_JuvenMother tuber of Juvenile 25.20