Gene detail

Detail information of GWHGAAEX005443/evm.TU.scaffold_163.56

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|14521524\|ref\|NP_127000.1\|	2.00E-93	amino acid amidohydrolase [Pyrococcus abyssi GE5]
nr	gi\|695026376\|ref\|XP_009400482.1\|	1.31E-177	PREDICTED: IAA-amino acid hydrolase ILR1-like 5 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q7XUA8\|ILL5_ORYSJ	4.00E-164	IAA-amino acid hydrolase ILR1-like 5 (Precursor)
trEMBL	tr\|I1PN43\|I1PN43_ORYGL	2.00E-163	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA04G0161200.1}
TAIR	AT5G54140	2.00E-142	IAA-leucine-resistant (ILR1)-like 3

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000159	1494583	1497531	-

Transcript Sequence
>GWHTAAEX005443 ATACAAAAAAAATTCTCACAAAAATAATTATTAAATGTATTTTTAGTGTAAACTCATAACAAATAAATACTATAAATCTAAATATAAAATTTTTAATTATTACTATTTTTTGAGAATAAATTGAGGACAAAATAACATTTTTATTGTTAGTTGTGGTGTGACCTATCAGTACTTCAAAGTGTGAAAAACCATTGGAAGCTCGCTCTTCTGCTTCAACCTTTCCCTTCCCTTGATGGCATCTTCTCTCTTGCTATTGACAACCCTAATTTTCTTCTTCCTCCTCCTCAGCTCATCTTCCCCTCTTCTTGGCGAAGAGCCGTATTTTTCAGACATCCTTCGGAGGGCGGAAGAAGAGCTCCCATGGCTTCTCTCCGTCCGCCGCCTCATCCACGAGCACCCCGAGCTTCGATATCAAGAGCACAACACAAGCGAGCTCATCCGATCCCACCTCGACACGCTGAGCATCCCTTACTCGTTTCCCTTCGCTGGCACCGGAATCGTCGCTCAAATCGGCTCAGGCGATTCTCCGATCATCGCTCTCCGCGCCGACATGGACGCTCTTCCCATTCAGGAATTGGTGGATTGGAAGCACAGGAGCAAGATTGATGGGGTAATGCACGCTTGCGGCCATGATGTTCATGTAGCGATGCTGCTTGGAGCTGCTAAATTGCTTAATGAGCGAAAGAGCGATCTAAAGGGAACGGTGAGGCTGCTGTTTCAGCCCGCAGAGGAAGGAGGTGCGGGCGCTTCGCAGATGATAGAGGACGGCGCACTGGAAGGAGTGGAGGCGATATTCGGCATGCACGTTGACTATAACCTGCCGACCGGCATCATTGCCTCTCTTCCCGGTCACTTCCAAGCTGCCGCCTGCTACTTCCAAGCAAGCATCCACAGCCGGGCTTCCCCTCCTCCTCTCAGCAGCGATCCTGTTGCCGTCGCTGCATTCACCATTTTGGCTCTGCAGCGCCTTGTTCGCGCAGAAGACGAAGACCATGCCCTGGTGGTTTCCGTGACGTTCGTGAGAGGCGGCCCGACTTCTTCTTCTTCTTCTTCTTCTTCCGTGGAATTGGGGGGCACGCTAAGAAGCATGACGACGCAAGGGCTGGTGAACCTGCGACGCCGAGTGCAGGAGGTGATAGATGGGCAGGCGCGGGTGCAGGGATGCAGAGCGGAAGTGAGGCTGGATGCGAAGGATCAGCCGATGTACCCCGGCACGGTGAACGACGCTGAGCTCCACGCGCACGTGCAGGCGGTGGGGAGGTCTCTTCTGGGAAGGGAGAGGGTGAGAACGGGGAAGCGGGTGATGGCCGGAGAGGACTTCTCTTTCTATCAGCAGCTTATTCCCGGCGTCTTCCTCACCATTGGAACCACAAATGAGGAGAAGCACGGCAAGCCTTACCCCGTTCATTCCCCCTTTTTCTTCGTCGACGAGGACGTCCTCCCTCTTGGCGCTGCCCTCCACGCTGCGCTCGCCCAGACCTACCTCCTCTCCCTCCTCCCTCCCCCCAATTAA

Network for GWHGAAEX005443

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01546.27	Peptidase_M20	102	415	2.70E-31

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.000
SRP064423	SRR2545915	Juvenile tuber	9.830
SRP108465	SRR5643513	five period of Gastrodia elata	37.540
	SRR5643514	five period of Gastrodia elata	59.100
	SRR5643515	five period of Gastrodia elata	35.810
	SRR5643524	five period of Gastrodia elata	57.580
	SRR5643525	five period of Gastrodia elata	53.650
	SRR5643528	five period of Gastrodia elata	48.180
	SRR5643658	five period of Gastrodia elata	69.220
	SRR5643659	five period of Gastrodia elata	34.390
	SRR5643660	five period of Gastrodia elata	31.110
	SRR5643661	five period of Gastrodia elata	44.230
	SRR5643662	five period of Gastrodia elata	37.510
	SRR5643663	five period of Gastrodia elata	49.810
	SRR5643664	five period of Gastrodia elata	44.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.100
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	45.380
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	45.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.660
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.660
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.440
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.930
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.020
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	59.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	59.720
SRP279888	Gastro	Gastrodia elata tuber	36.30
	Juven	Juvenile tuber	50.67
	Mother_Gastro	Mother tuber of Gastrodia elata	28.17
	Mother_Juven	Mother tuber of Juvenile	24.40