Gene detail

Detail information of GWHGAAEX005450/evm.TU.scaffold_163.64

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|269839325\|ref\|YP_003324017.1\|	2.00E-44	chaperone DnaJ domain-containing protein [Thermobaculum terrenum ATCC BAA-798]
KOG	KOG0714	2.00E-170	Molecular chaperone (DnaJ superfamily)
nr	gi\|695011426\|ref\|XP_009392429.1\|	0	PREDICTED: dnaJ homolog subfamily B member 4-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9LZK5\|DNJ19_ARATH	2.00E-48	DnaJ protein ERDJ3B (Precursor)
trEMBL	tr\|A0A067JNB8\|A0A067JNB8_JATCU	3.00E-179	Uncharacterized protein {ECO:0000313\|EMBL:KDP21009.1}
TAIR	AT2G20560	2.00E-170	DNAJ heat shock family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000159	1626417	1630428	-

Transcript Sequence
>GWHTAAEX005450 AAATAATTTGAGGCTAAAAAAATTATTTACCTCAAAAAAAACCAAAGGCCGCCACCTATGTATGTTCCGAGAGATTTCGAGAACCTTCGTCATTCATCAGGGCTCTTTTCATGCCCCATTTCCAGACTCTTCGTCTCTTCTCGTCCAACTTCCTATGCTCGTCCTCTCTTAAAACAAACCGCTCTCAATTTCCCCATTCAGAAACCACGACGACCAAGCGAAGAAGAAGCGTAGGGAAAGTGCCAGAGGAAGCGAAGAAGGAAAGTCATAGCGAGAGATCCGGATCTAGCAGTAGCCATAGATCGGGGATGGGAGTGGATTACTACAAGGTTCTCCAGGTCGATCGAAACGCAAAGGACGATGATCTTAAGAAGGCATACCGCAAGCTCGCCATGAAGTGGCACCCCGACAAAAACCCTAACAACAAGAAAGAGGCCGAGGCCAAATTCAAACAAATCTCCGAGGCCTACGAGGTCTTGAGCGATTCTCAGAAGCGGGCCGTGTTTGATAAGTACGGCGAAGAGGGGCTTAAAGGGGAGATTCCGACGGCTGCTGGTGGAGCTGGTGGGGCTTCTTTCTTCCCCGGAGGCGGTGATGGAGGGCCAAACGTATTTAGGTTTAATCCGAGGAGCGCAGATGACATCTTCTCGGAGTTTTTCGGATTCTCGAGCCCATTTGGGGGAATGGGAGGTGCTAGTAAGGGTGTAAGTGGGATGAGAGGGGGAACGAGGTTCACGTCTTCTCTCTTTGGAGATGATGTCTTTGGATCTGCTTTTGGCGGTATGAGAGAGGGTTCGATGGAATCGCTGAGGCCGCAGAAACCGCTTCCCATAGAGAACAAATTACTCTGCAGTCTGGAGGAGTTGTACAAGGGAACGACGAAGAAGATGAAGATTTCCAGAGAGATTGCCGACAGCAGCGGGAAGACACTGCCAGTGGAGGAAATCTTGACCATAGACGTAAAGCCGGGATGGAAGAAAGGGACGAAGATTACCTTCCCTGAGAAGGGGAACGAGCAGCCGAACTCCGTCCCGGCAGACGTTGTGTTCATCATTGACGAGAGGCCACACGAACTGTTTCAGAGGGAAGGAAATGATCTGATCTTGAAGCAAAAGGTGTCCTTGTCGGAGGCTCTCACAGGCTACACCGTCCATCTGAAGACTCTAGATGGCCGGAGCATCGCCATTCCCATAAGCTCCATCATTCATTCTGGGTACGAGGAGGTGGTCCCAGGGGAGGGCATGCCCTTGCCAAAGGACCCCTCCAAGAAGGGCAATCTCAGGATCAAGTTTGACATCAAGTTTCCCACAAAGTTAACTCCTGAGCAGAAGGCAGGGATTAAGAAGCTGCTGCCTTCATGAAAGCTCTTCCAAAGGATGGCTGCTGCCCTTCCAGTTGACGCAGAGTTCCATGAAGACAGATTTGTGTGGTACTTGTCTTGCAATTATTCTTCTCTTTTAGTTCCATGCAATAAATAGTAAATATTTTTTGTATCAAAGACATTCCATTCTATAATGAAGACAACATATATTACATATCTATGTATATGTTATCATTTAGTTCATTAGTTCCAAATTTGTTAGAGATGGCTATTCTTTGAAGTGGCAACTCCATATCATGCTATTTGCTTGATGATTATCCGAAAATCTTTTTTTATGCATTACTTTTAATTCGTACATGGATATACCAATATTTGACAGTCTTATATATAATGTACTTGATTAATTAAAAGATATATGGACACCAAAGTGTAATCGAATCATTGTTGATAATGTTTATAGGGGAAGCTGACTTTATATGCAATAAAAGAGATTATCAATGCTTTCCATGCTAGAGCTGGCTTACCCACTACTGAGCATAGCTATAGATTCTGCTACAAGAATATGAAAGAGGTTTATGAAGTTATGCTGGCTTGCTACATGAAGTAGTAGATGGTGTTGGCATTATGTTTAGCATGTTTTGATAACCTTTTTGAGTTCTTTTATAATCGACTTTCTTAATTCCATGCAATTGTGACATTTTTGATAAGGTTTGTTGGTGCTAAACTTCACGACTCAATGTTCCCTCTCTATAGTAAAAGTTTTGAGGTGTTTTGTGCAAAAGATTCTATGATGCTAGAGCACATCATCTTAGTGTAAATAATCAATATCTTGATACTATCCATAAATTGAATTTCCCTGACCTTGATGTTGTTCTCTTGGACTGTTTGGATGAAGATTTTGATTATGATACATTGCAA

Network for GWHGAAEX005450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	70	133	4.90E-27
PF01556.17	DnaJ_C	241	399	1.50E-41

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006457	Biological Process	protein folding
GO:0051082	Molecular Function	unfolded protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	82.270
SRP064423	SRR2545915	Juvenile tuber	751.440
SRP108465	SRR5643513	five period of Gastrodia elata	42.430
	SRR5643514	five period of Gastrodia elata	37.110
	SRR5643515	five period of Gastrodia elata	45.910
	SRR5643524	five period of Gastrodia elata	34.280
	SRR5643525	five period of Gastrodia elata	138.490
	SRR5643528	five period of Gastrodia elata	196.340
	SRR5643658	five period of Gastrodia elata	50.750
	SRR5643659	five period of Gastrodia elata	127.880
	SRR5643660	five period of Gastrodia elata	122.200
	SRR5643661	five period of Gastrodia elata	155.450
	SRR5643662	five period of Gastrodia elata	128.110
	SRR5643663	five period of Gastrodia elata	130.010
	SRR5643664	five period of Gastrodia elata	160.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	60.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	53.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.830
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	39.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	40.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	60.860
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	57.490
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	45.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	45.970
SRP279888	Gastro	Gastrodia elata tuber	83.79
	Juven	Juvenile tuber	50.08
	Mother_Gastro	Mother tuber of Gastrodia elata	112.31
	Mother_Juven	Mother tuber of Juvenile	58.13