Detail information of GWHGAAEX005454/evm.TU.scaffold_163.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|289596466|ref|YP_003483162.1|1.00E-30CTP synthase [Aciduliprofundum boonei T469]
KOGKOG23873.00E-63CTP synthase (UTP-ammonia lyase)
nrgi|672121181|ref|XP_008783882.1|6.21E-68PREDICTED: CTP synthase isoform X2 [Phoenix dactylifera]
trEMBLtr|V4TMS5|V4TMS5_9ROSI1.00E-65Uncharacterized protein {ECO:0000313|EMBL:ESR61783.1} (Fragment)
TAIRAT3G126703.00E-63CTP synthase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015916872411709914-
Transcript Sequence

Network for GWHGAAEX005454

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00117.27GATase31101.90E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01937pyrG, CTPS Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.020
SRR2545915Juvenile tuber23.080
SRP108465SRR5643513five period of Gastrodia elata4.210
SRR5643514five period of Gastrodia elata2.660
SRR5643515five period of Gastrodia elata1.740
SRR5643524five period of Gastrodia elata1.900
SRR5643525five period of Gastrodia elata2.800
SRR5643528five period of Gastrodia elata1.670
SRR5643658five period of Gastrodia elata1.800
SRR5643659five period of Gastrodia elata4.520
SRR5643660five period of Gastrodia elata4.370
SRR5643661five period of Gastrodia elata2.520
SRR5643662five period of Gastrodia elata4.230
SRR5643663five period of Gastrodia elata6.510
SRR5643664five period of Gastrodia elata5.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.150
SRR6049655Rhizomagastrodiae_C368-T10_good_129.710
SRR6049656Rhizomagastrodiae_C368-T07_good_140.310
SRR6049657Rhizomagastrodiae_C368-T07_good_126.300
SRR6049658Rhizomagastrodiae_C368-T04_good_128.050
SRR6049659Rhizomagastrodiae_C368-T04_good_119.250
SRR6049660Rhizomagastrodiae_C368-T01_good_124.550
SRR6049661Rhizomagastrodiae_C368-T04_good_141.040
SRR6049662Rhizomagastrodiae_C368-T01_good_130.910
SRR6049663Rhizomagastrodiae_C368-T01_good_115.450
SRR6049664Rhizomagastrodiae_C368-T10_good_117.880
SRR6049665Rhizomagastrodiae_C368-T10_good_117.880
SRP279888GastroGastrodia elata tuber 33.60
JuvenJuvenile tuber27.42
Mother_GastroMother tuber of Gastrodia elata 3.67
Mother_JuvenMother tuber of Juvenile 7.06