Detail information of GWHGAAEX005456/evm.TU.scaffold_163.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743756759|ref|XP_010918530.1|5.40E-142PREDICTED: G patch domain-containing protein 8 [Elaeis guineensis]
Swissprottr|Q9SLC6|STIP2_ARATH2.00E-08Septin and tuftelin-interacting protein 1 homolog 2
trEMBLtr|M0T1Q6|M0T1Q6_MUSAM8.00E-140Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P25810_001}
TAIRAT5G26605_29.00E-55Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015917417651773782+
Transcript Sequence

Network for GWHGAAEX005456

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01585.22G-patch671072.20E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.850
SRR2545915Juvenile tuber21.410
SRP108465SRR5643513five period of Gastrodia elata8.770
SRR5643514five period of Gastrodia elata9.210
SRR5643515five period of Gastrodia elata8.220
SRR5643524five period of Gastrodia elata7.010
SRR5643525five period of Gastrodia elata16.750
SRR5643528five period of Gastrodia elata16.250
SRR5643658five period of Gastrodia elata14.420
SRR5643659five period of Gastrodia elata11.950
SRR5643660five period of Gastrodia elata14.290
SRR5643661five period of Gastrodia elata9.880
SRR5643662five period of Gastrodia elata11.730
SRR5643663five period of Gastrodia elata13.440
SRR5643664five period of Gastrodia elata13.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.150
SRR6049655Rhizomagastrodiae_C368-T10_good_16.630
SRR6049656Rhizomagastrodiae_C368-T07_good_19.760
SRR6049657Rhizomagastrodiae_C368-T07_good_112.140
SRR6049658Rhizomagastrodiae_C368-T04_good_113.360
SRR6049659Rhizomagastrodiae_C368-T04_good_112.190
SRR6049660Rhizomagastrodiae_C368-T01_good_110.740
SRR6049661Rhizomagastrodiae_C368-T04_good_112.020
SRR6049662Rhizomagastrodiae_C368-T01_good_18.680
SRR6049663Rhizomagastrodiae_C368-T01_good_19.790
SRR6049664Rhizomagastrodiae_C368-T10_good_19.030
SRR6049665Rhizomagastrodiae_C368-T10_good_19.030
SRP279888GastroGastrodia elata tuber 13.19
JuvenJuvenile tuber8.21
Mother_GastroMother tuber of Gastrodia elata 14.88
Mother_JuvenMother tuber of Juvenile 14.93