Detail information of GWHGAAEX005457/evm.TU.scaffold_163.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24420Uncharacterized conserved protein, contains PA domain
nrgi|695050984|ref|XP_009413504.1|0PREDICTED: signal peptide peptidase-like 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q53P98|SIPL2_ORYSJ0Signal peptide peptidase-like 2 (Precursor)
trEMBLtr|K3ZHZ7|K3ZHZ7_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si026199m}
TAIRAT2G431050Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015917818341818743+
Transcript Sequence

Network for GWHGAAEX005457

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02225.21PA1131831.60E-09
PF04258.12Peptidase_A22B2585378.70E-80
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.400
SRR2545915Juvenile tuber31.270
SRP108465SRR5643513five period of Gastrodia elata32.330
SRR5643514five period of Gastrodia elata40.710
SRR5643515five period of Gastrodia elata33.090
SRR5643524five period of Gastrodia elata44.130
SRR5643525five period of Gastrodia elata19.400
SRR5643528five period of Gastrodia elata24.770
SRR5643658five period of Gastrodia elata29.330
SRR5643659five period of Gastrodia elata24.880
SRR5643660five period of Gastrodia elata22.080
SRR5643661five period of Gastrodia elata25.160
SRR5643662five period of Gastrodia elata20.060
SRR5643663five period of Gastrodia elata23.970
SRR5643664five period of Gastrodia elata18.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.420
SRR6049655Rhizomagastrodiae_C368-T10_good_126.920
SRR6049656Rhizomagastrodiae_C368-T07_good_129.460
SRR6049657Rhizomagastrodiae_C368-T07_good_125.290
SRR6049658Rhizomagastrodiae_C368-T04_good_124.090
SRR6049659Rhizomagastrodiae_C368-T04_good_123.140
SRR6049660Rhizomagastrodiae_C368-T01_good_124.680
SRR6049661Rhizomagastrodiae_C368-T04_good_125.980
SRR6049662Rhizomagastrodiae_C368-T01_good_135.430
SRR6049663Rhizomagastrodiae_C368-T01_good_131.910
SRR6049664Rhizomagastrodiae_C368-T10_good_146.240
SRR6049665Rhizomagastrodiae_C368-T10_good_146.240
SRP279888GastroGastrodia elata tuber 23.61
JuvenJuvenile tuber35.18
Mother_GastroMother tuber of Gastrodia elata 35.53
Mother_JuvenMother tuber of Juvenile 38.91