Detail information of GWHGAAEX005491/evm.TU.scaffold_164.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47654.00E-99Uncharacterized conserved protein
nrgi|743758091|ref|XP_010925035.1|4.57E-165PREDICTED: uncharacterized protein LOC105047687 isoform X1 [Elaeis guineensis]
trEMBLtr|A2ZV77|A2ZV77_ORYSJ1.00E-146Uncharacterized protein {ECO:0000313|EMBL:EAZ12624.1}
TAIRAT1G489504.00E-99C3HC zinc finger-like

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016819674032035281+
Transcript Sequence

Network for GWHGAAEX005491

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07967.12zf-C3HC611852.60E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.120
SRR2545915Juvenile tuber18.800
SRP108465SRR5643513five period of Gastrodia elata12.570
SRR5643514five period of Gastrodia elata10.770
SRR5643515five period of Gastrodia elata11.130
SRR5643524five period of Gastrodia elata11.190
SRR5643525five period of Gastrodia elata14.450
SRR5643528five period of Gastrodia elata13.820
SRR5643658five period of Gastrodia elata17.580
SRR5643659five period of Gastrodia elata14.250
SRR5643660five period of Gastrodia elata15.830
SRR5643661five period of Gastrodia elata13.340
SRR5643662five period of Gastrodia elata15.500
SRR5643663five period of Gastrodia elata15.390
SRR5643664five period of Gastrodia elata18.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.670
SRR6049655Rhizomagastrodiae_C368-T10_good_115.730
SRR6049656Rhizomagastrodiae_C368-T07_good_117.940
SRR6049657Rhizomagastrodiae_C368-T07_good_121.150
SRR6049658Rhizomagastrodiae_C368-T04_good_120.300
SRR6049659Rhizomagastrodiae_C368-T04_good_122.040
SRR6049660Rhizomagastrodiae_C368-T01_good_119.880
SRR6049661Rhizomagastrodiae_C368-T04_good_119.760
SRR6049662Rhizomagastrodiae_C368-T01_good_114.750
SRR6049663Rhizomagastrodiae_C368-T01_good_115.150
SRR6049664Rhizomagastrodiae_C368-T10_good_114.880
SRR6049665Rhizomagastrodiae_C368-T10_good_114.880
SRP279888GastroGastrodia elata tuber 14.84
JuvenJuvenile tuber24.29
Mother_GastroMother tuber of Gastrodia elata 10.70
Mother_JuvenMother tuber of Juvenile 19.43