Gene detail

Detail information of GWHGAAEX005494/evm.TU.scaffold_164.35

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|410668843\|ref\|YP_006921214.1\|	4.00E-28	serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
KOG	KOG0582	0	Ste20-like serine/threonine protein kinase
nr	gi\|743838521\|ref\|XP_010936724.1\|	0	PREDICTED: serine/threonine-protein kinase BLUS1 isoform X1 [Elaeis guineensis]
Swissprot	tr\|O23304\|BLUS1_ARATH	4.00E-96	Serine/threonine-protein kinase BLUS1
trEMBL	tr\|M0SRQ8\|M0SRQ8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P24470_001}
TAIR	AT5G14720	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000168	2209511	2267096	+

Transcript Sequence
>GWHTAAEX005494 GTTAAATTTCACAAGCCCTTGTGATAGATTTTACTTGGAAATATTTTTTATGAAGTCATACAAATTGATTACAAGGAGTATGACATTGCTGATTTGATGTGCGGCTTGCGGATTGGGGAGAGGATTATTGAGGATTAGCGTGAGGAGTTGCGGCTTCGCTCGACAAGTCTTCCTTCGATGACTAGGGATCTAGAGCTTGCTGAAAAATAGGACGAGGTGGCTCGGTTGATGTCTGAGTTACTGCTCGCGATCGAGGGAAAGGATCGGCTAGCGGCTCAGCAGTTGGTTTTCTTCCGTTGCCGTTTAACGAGATAATGGCTCTTGGGCGAAGGCATTTTGGGAATCAAATTTTGTACTGACGGTGTTATATCACTCTGTTCAAGACAAGTACACAGATCTTCTCCAAATCTGGTCAATTCTATAACGATGGTTCTGTTCCCATCTCTTTGGTTCTAGTTGTGGAATCTCAGAATCATAATTGCCTGCCGAAGAACAGCGGAATATGCTCATTCAAACTGGACATTTTTAAAACTACATGGGTTTTTTATTGACATTATTTAAGAGCGAGCCATGAGGCATGAACTTGAGAAAAAGTTTCCTGCCAATCCAAAGGACTACCAGTTATACGAGGAAGTTGGTGAAGGTGTTAGTGCAACAGTATACCGGGCTTTGTGCATTCCTTTGAATGAGGTGGTTGCTATCAAGGTTTTGGATCTTGAAAGGTGCAATAATGATTTGGATGGCATCAGACGTGAAGTACAAACCATGATGCTAATTCATCATCCAAATGTAGTGCAGGCATACTGCTCTTTTCCGGCAGGCGACAAACTCTGGGTTGTGATGCCTTACATGGCTGGTGGTTCTTGTCTTCATATTATGAAATTTGCTCATTCTGAGGGCTTTGAGGAGCCTGTTATTGCTACTCTCTTATGTGAGGTTCTTAAAGCTCTTGTTTATCTTCATTTCGAAGGGCACATACATAGAGATATCAAGGCTGGCAATGTGCTAATTGATGCCAATGGAGCTGTTAAGCTTGCAGACTTTGGTGTAGCAGCTTGTATGTTTGACACTGGGGACAGGCAGCGAGCTCGAAATACATTTGTGGGAACTCCATGCTGGATGGCTCCAGAAGTCATGCAACAATTACATGGATATGATTTCAAAGCTGATATTTGGTCATTTGGCATAACAGCGTTAGAACTTGCTCACGGGCACGCTCCCTTTTCTAAATACCCTCCAATGAAGGTATTACTTATGACCTTACAAAATGCACCACCAGGTCTTGATTATGAAAGAGACAAAAAGTTTTCTAAGTCATTCAAAGAGATGGTTGCTGCATGCTTAGTGAAGGATCCAAAGAAGCGCCCCACTGCAGAAAAACTTATGAAGCATCATTTCTTCAAATACGGCCGTTCAAATGATTATCTTGCCCGTGCCACTCTTGATGGTCTTCCTCCGCTTCCAGATCGTTTTAGGGCATTAAAGGGAAGAGAGAGTGATATTCTTCTGAATAGGGCTGACTGTGACAAAGAGCAACTTTCACAGCGTGAATACATCCGTGGCATCAGTGCTTGGAATTTTAACCTTGAAGATTTGAAATCCCAGGCTGCTCTTATTCATGAAGAGACTCCCAGTTTAGAAGAATTTGATACGAACCATGGTACTAAATATGAAGATGACACTTCTGAACCTAATGATTCTCTACATCCGCTTACTTCCCATGAAAAAGTTGATTCTATCAAAGTTGTTGCATCAAGGAAGGAAGAGCTTCAAGATCTACAAGGTTTTGCTGGTTTACTAGGCGCTACATTTCCTTTTCGTCCTCTTAAAGCACTAGAAGACTGTTTTGATGTCTATGAGGATGAGATCATGGACGGAAGTCCCAACAGGCAGGCTGTTTTGAAGTCAGATTCAAAATCAATAATTTTTAAGCAGCATGAATCAAGTGAAGTGGATTCTGAATGCAAAATTACTGGTGGTGGAAATTTAGAAAACAGCACTTTTGGACGGCAGAAAGTATCAAGTGGTTCACTTCTACAAGAACATGCACATTCTCAAAATACTTTTGTAAACCCCGAGAGGGATGATTTACAGCAGAAGCATCATTGCGAAAGAAATTACAGTGGTACGTTATTATGCCGTTATTCCCCTAACCATTCATCCGTGAATTTGCAAAATGAATCGTCAGAAGGGCAATTTGTTCAACGTAAGGGACGCTTCAAGATTACTTCATCAGATCCTGGAAGTAAGGTAGCTGCATCAGTAAATCTAGCAGGTGGCTTAACAACAATTGGTGCTTTGGAGGCTGCCGCAGTTCTTCCAACATTGCAATTTTTATTGCAACAAAATGCTATTCAAAGAGAGCAAATAGTTAAATTACTCAAACTAGTTGAATCTTCTGGCCTTCTTGCTGAACCTTCGGATTTGGTCGATAGTGAATTATCATCCAAGGCATCTTTAACGGCTATCAAGGAGAGTGTGCTACAGTCCTACATCCTTCAACTTCAGCAACAGGTTGATATTCTTACTGACAAGTTGCAAAGAATTAAATTTGGAAACACTCAGCTGGAACGGAAGTTATTTTCCTTTCAGAAGGGTTTGATAAGCAACGAAAAGGAGCCGTCAGATACGAACTCACTATAAGCTTTCGAATGCAGCTGCGTTCTCATTCATTCATTATATAATATATATTCTGTACAATTGTAGTGTGTTTTCTTGACTTTTATTCTATGCCACAATTTTTTATTCTTGCCTTTTAATTATTCTTTTGTGAATGCATCTTATATATTTAATGTATTTTTTATTTTAATGCATTGATTTTTCTCTACTTAAAAGTATAATTGTGGGATATTTGCTTGCAC

Network for GWHGAAEX005494

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	16	277	1.10E-59

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE20-Fray

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	36.670
SRP064423	SRR2545915	Juvenile tuber	30.380
SRP108465	SRR5643513	five period of Gastrodia elata	30.970
	SRR5643514	five period of Gastrodia elata	34.430
	SRR5643515	five period of Gastrodia elata	28.810
	SRR5643524	five period of Gastrodia elata	31.190
	SRR5643525	five period of Gastrodia elata	28.650
	SRR5643528	five period of Gastrodia elata	37.600
	SRR5643658	five period of Gastrodia elata	38.360
	SRR5643659	five period of Gastrodia elata	20.080
	SRR5643660	five period of Gastrodia elata	19.450
	SRR5643661	five period of Gastrodia elata	21.160
	SRR5643662	five period of Gastrodia elata	18.940
	SRR5643663	five period of Gastrodia elata	20.340
	SRR5643664	five period of Gastrodia elata	17.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	37.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	36.430
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	37.010
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.890
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.750
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.400
SRP279888	Gastro	Gastrodia elata tuber	26.84
	Juven	Juvenile tuber	43.81
	Mother_Gastro	Mother tuber of Gastrodia elata	37.40
	Mother_Juven	Mother tuber of Juvenile	46.62