Detail information of GWHGAAEX005496/evm.TU.scaffold_165.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00483.00E-78Transcription factor, Myb superfamily
nrgi|672125898|ref|XP_008786382.1|4.74E-85PREDICTED: transcription factor MYB39-like [Phoenix dactylifera]
Swissprottr|Q50EX6|ODO1_PETHY4.00E-67Protein ODORANT1
trEMBLtr|W1P7G7|W1P7G7_AMBTC5.00E-79Uncharacterized protein {ECO:0000313|EMBL:ERN03536.1}
TAIRAT5G167703.00E-78myb domain protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001676617868021-
Transcript Sequence

Network for GWHGAAEX005496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14618.80E-17
PF00249.30Myb_DNA-binding671121.40E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.530
SRR2545915Juvenile tuber6.790
SRP108465SRR5643513five period of Gastrodia elata10.480
SRR5643514five period of Gastrodia elata1.410
SRR5643515five period of Gastrodia elata5.900
SRR5643524five period of Gastrodia elata4.180
SRR5643525five period of Gastrodia elata0.670
SRR5643528five period of Gastrodia elata0.150
SRR5643658five period of Gastrodia elata0.170
SRR5643659five period of Gastrodia elata0.740
SRR5643660five period of Gastrodia elata4.430
SRR5643661five period of Gastrodia elata3.210
SRR5643662five period of Gastrodia elata2.620
SRR5643663five period of Gastrodia elata0.260
SRR5643664five period of Gastrodia elata2.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.260
SRR6049655Rhizomagastrodiae_C368-T10_good_16.090
SRR6049656Rhizomagastrodiae_C368-T07_good_11.650
SRR6049657Rhizomagastrodiae_C368-T07_good_11.500
SRR6049658Rhizomagastrodiae_C368-T04_good_11.670
SRR6049659Rhizomagastrodiae_C368-T04_good_11.510
SRR6049660Rhizomagastrodiae_C368-T01_good_13.360
SRR6049661Rhizomagastrodiae_C368-T04_good_13.100
SRR6049662Rhizomagastrodiae_C368-T01_good_11.600
SRR6049663Rhizomagastrodiae_C368-T01_good_10.970
SRR6049664Rhizomagastrodiae_C368-T10_good_12.240
SRR6049665Rhizomagastrodiae_C368-T10_good_12.240
SRP279888GastroGastrodia elata tuber 5.44
JuvenJuvenile tuber0.11
Mother_GastroMother tuber of Gastrodia elata 11.19
Mother_JuvenMother tuber of Juvenile 4.54