Detail information of GWHGAAEX005498/evm.TU.scaffold_165.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337285964|ref|YP_004625437.1|3.00E-135alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
KOGKOG10500Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|672160641|ref|XP_008800104.1|0PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [Phoenix dactylifera]
Swissprottr|O23617|TPS5_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
trEMBLtr|A0A061GDN3|A0A061GDN3_THECC0Trehalose phosphatase/synthase 5 isoform 1 {ECO:0000313|EMBL:EOY25144.1}
TAIRAT1G680200UDP-Glycosyltransferase / trehalose-phosphatase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000167141065144799-
Transcript Sequence

Network for GWHGAAEX005498

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00982.20Glyco_transf_20605441.50E-185
PF02358.15Trehalose_PPase5958281.20E-77
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20

KEGG pathway

KO Enzyme pathway mapID
K16055TPS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.250
SRR2545915Juvenile tuber35.880
SRP108465SRR5643513five period of Gastrodia elata55.320
SRR5643514five period of Gastrodia elata49.530
SRR5643515five period of Gastrodia elata46.190
SRR5643524five period of Gastrodia elata42.720
SRR5643525five period of Gastrodia elata38.900
SRR5643528five period of Gastrodia elata38.230
SRR5643658five period of Gastrodia elata42.210
SRR5643659five period of Gastrodia elata37.050
SRR5643660five period of Gastrodia elata35.200
SRR5643661five period of Gastrodia elata36.090
SRR5643662five period of Gastrodia elata39.580
SRR5643663five period of Gastrodia elata37.110
SRR5643664five period of Gastrodia elata37.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.910
SRR6049655Rhizomagastrodiae_C368-T10_good_172.220
SRR6049656Rhizomagastrodiae_C368-T07_good_170.460
SRR6049657Rhizomagastrodiae_C368-T07_good_166.560
SRR6049658Rhizomagastrodiae_C368-T04_good_173.660
SRR6049659Rhizomagastrodiae_C368-T04_good_179.190
SRR6049660Rhizomagastrodiae_C368-T01_good_178.060
SRR6049661Rhizomagastrodiae_C368-T04_good_175.330
SRR6049662Rhizomagastrodiae_C368-T01_good_185.470
SRR6049663Rhizomagastrodiae_C368-T01_good_176.870
SRR6049664Rhizomagastrodiae_C368-T10_good_187.290
SRR6049665Rhizomagastrodiae_C368-T10_good_187.290
SRP279888GastroGastrodia elata tuber 36.51
JuvenJuvenile tuber60.34
Mother_GastroMother tuber of Gastrodia elata 38.78
Mother_JuvenMother tuber of Juvenile 39.98