Detail information of GWHGAAEX005500/evm.TU.scaffold_165.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG40091.00E-48NADH-ubiquinone oxidoreductase, subunit NDUFB10/PDSW
nrgi|743826914|ref|XP_010933439.1|1.88E-58PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Elaeis guineensis]
Swissprottr|Q94C12|NDBAB_ARATH3.00E-49NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
trEMBLtr|B6SJP9|B6SJP9_MAIZE4.00E-58Putative uncharacterized protein {ECO:0000313|EMBL:ACG25082.1}
TAIRAT3G184101.00E-48Complex I subunit NDUFS6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000167168354168768-
Transcript Sequence

Network for GWHGAAEX005500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03966NDUFB10 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms126.940
SRR2545915Juvenile tuber143.440
SRP108465SRR5643513five period of Gastrodia elata487.950
SRR5643514five period of Gastrodia elata740.260
SRR5643515five period of Gastrodia elata462.100
SRR5643524five period of Gastrodia elata535.250
SRR5643525five period of Gastrodia elata920.210
SRR5643528five period of Gastrodia elata600.720
SRR5643658five period of Gastrodia elata664.940
SRR5643659five period of Gastrodia elata385.540
SRR5643660five period of Gastrodia elata429.720
SRR5643661five period of Gastrodia elata435.750
SRR5643662five period of Gastrodia elata378.260
SRR5643663five period of Gastrodia elata376.920
SRR5643664five period of Gastrodia elata446.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1456.990
SRR6049655Rhizomagastrodiae_C368-T10_good_1574.390
SRR6049656Rhizomagastrodiae_C368-T07_good_1513.620
SRR6049657Rhizomagastrodiae_C368-T07_good_1326.400
SRR6049658Rhizomagastrodiae_C368-T04_good_1356.010
SRR6049659Rhizomagastrodiae_C368-T04_good_1342.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1343.400
SRR6049661Rhizomagastrodiae_C368-T04_good_1322.120
SRR6049662Rhizomagastrodiae_C368-T01_good_1612.310
SRR6049663Rhizomagastrodiae_C368-T01_good_1430.260
SRR6049664Rhizomagastrodiae_C368-T10_good_1636.470
SRR6049665Rhizomagastrodiae_C368-T10_good_1636.470
SRP279888GastroGastrodia elata tuber 306.91
JuvenJuvenile tuber371.62
Mother_GastroMother tuber of Gastrodia elata 237.29
Mother_JuvenMother tuber of Juvenile 226.53