Detail information of GWHGAAEX005509/evm.TU.scaffold_165.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672164876|ref|XP_008802328.1|3.53E-76PREDICTED: tetraspanin-19-like [Phoenix dactylifera]
Swissprottr|Q940P5|TET19_ARATH7.00E-54Tetraspanin-19
trEMBLtr|M0RG10|M0RG10_MUSAM1.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P06830_001}
TAIRAT2G202308.00E-26Tetraspanin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000167654000661956+
Transcript Sequence

Network for GWHGAAEX005509

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin111162.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.140
SRR2545915Juvenile tuber17.070
SRP108465SRR5643513five period of Gastrodia elata15.920
SRR5643514five period of Gastrodia elata17.590
SRR5643515five period of Gastrodia elata18.480
SRR5643524five period of Gastrodia elata19.690
SRR5643525five period of Gastrodia elata22.000
SRR5643528five period of Gastrodia elata18.950
SRR5643658five period of Gastrodia elata20.980
SRR5643659five period of Gastrodia elata13.120
SRR5643660five period of Gastrodia elata12.130
SRR5643661five period of Gastrodia elata14.560
SRR5643662five period of Gastrodia elata16.320
SRR5643663five period of Gastrodia elata11.680
SRR5643664five period of Gastrodia elata11.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.070
SRR6049655Rhizomagastrodiae_C368-T10_good_114.480
SRR6049656Rhizomagastrodiae_C368-T07_good_113.390
SRR6049657Rhizomagastrodiae_C368-T07_good_110.790
SRR6049658Rhizomagastrodiae_C368-T04_good_113.050
SRR6049659Rhizomagastrodiae_C368-T04_good_113.540
SRR6049660Rhizomagastrodiae_C368-T01_good_112.410
SRR6049661Rhizomagastrodiae_C368-T04_good_112.320
SRR6049662Rhizomagastrodiae_C368-T01_good_117.310
SRR6049663Rhizomagastrodiae_C368-T01_good_116.080
SRR6049664Rhizomagastrodiae_C368-T10_good_118.850
SRR6049665Rhizomagastrodiae_C368-T10_good_118.850
SRP279888GastroGastrodia elata tuber 17.10
JuvenJuvenile tuber10.46
Mother_GastroMother tuber of Gastrodia elata 52.34
Mother_JuvenMother tuber of Juvenile 35.94