Detail information of GWHGAAEX005512/evm.TU.scaffold_165.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02061.00E-17P-type ATPase
nrgi|743812667|ref|XP_010929488.1|1.78E-19PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2 [Elaeis guineensis]
Swissprottr|P98205|ALA2_ARATH4.00E-18Phospholipid-transporting ATPase 2
trEMBLtr|M0UC15|M0UC15_MUSAM3.00E-19Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP24570_001}
TAIRAT5G442401.00E-17aminophospholipid ATPase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000167817663818896-
Transcript Sequence

Network for GWHGAAEX005512

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13246.5Cation_ATPase13522.30E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000166Molecular Functionnucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.540
SRR2545915Juvenile tuber0.520
SRP108465SRR5643513five period of Gastrodia elata0.850
SRR5643514five period of Gastrodia elata0.770
SRR5643515five period of Gastrodia elata1.740
SRR5643524five period of Gastrodia elata1.250
SRR5643525five period of Gastrodia elata1.590
SRR5643528five period of Gastrodia elata2.420
SRR5643658five period of Gastrodia elata2.480
SRR5643659five period of Gastrodia elata2.070
SRR5643660five period of Gastrodia elata3.790
SRR5643661five period of Gastrodia elata1.840
SRR5643662five period of Gastrodia elata4.440
SRR5643663five period of Gastrodia elata4.170
SRR5643664five period of Gastrodia elata8.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.820
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_11.780
SRR6049657Rhizomagastrodiae_C368-T07_good_10.870
SRR6049658Rhizomagastrodiae_C368-T04_good_10.470
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.410
SRR6049661Rhizomagastrodiae_C368-T04_good_10.670
SRR6049662Rhizomagastrodiae_C368-T01_good_10.500
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.990
SRR6049665Rhizomagastrodiae_C368-T10_good_10.990
SRP279888GastroGastrodia elata tuber 0.72
JuvenJuvenile tuber0.45
Mother_GastroMother tuber of Gastrodia elata 2.65
Mother_JuvenMother tuber of Juvenile 2.14